Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4444 |
Symbol | |
ID | 4596963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4698265 |
End bp | 4699836 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639779055 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_925628 |
Protein GI | 119718663 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCGC AGCCGGTCCC GGACCTGCCC GCGCAGGCCG AGGTGGTCGT CGTCGGCGCC GGCCACAACT CGCTGATCGC CGCGGCGTAC CTGGCCCGAG CGGGTCTCGA GGTGCTGGTG CTCGAGGCGA ACGAGACGCC GGGCGGCAAC ACCCGCACCG AGCAGCTGAC CCTGCCGGGC TTCGCCCACG ACTCGTGCAG CAGCGCGCAC GTGCTGATCC AGAACAACCC GCTGATCCGC GACGACGAGC TCGGCCTGCT CGCCGACCAC GGCCTGGAGT ACCTCGCGAC CGACCCGGCG GTGGTGATGC CCCAGCAGGA CGGCGACGTG CTCGTGATGC ACCGCGACCT GGAGGGCACC GCCGCCGAGA TCGCCCGGTG GTCCAGCGCC GACGCGCGTG CTTTCGAGGA GCTCGTGGGC CAGTGGCGCG GCGGGCTCTC GGCCGCGCAC GGGCGCTGGA GCTCGCACCT GCCCCAGCCC GACGACGACG CGAGCCGGCG TTACCTCGCC CTGCGCCGCC GCAGCGCCTG GGACGTCGTG CACGAGCAGT TCACCCATCC GGTCATCCGC TCCTTCGTGC TCTGGCTGGC GATGGCCACG ATCCAGGATC CCCGCCGACC CGGCACCGGC TTCCTGCCAT CCTCCCTGGT CGCCGGCCGC CTCGACTTCG GATGGAGCAC ACCGGTCGGC GGCAGCCAGG CGCTGCCGGA CGCGCTCGTC CGGCTGATCG AGAAGCACGG CGGCCGCGTG GTCTGCTCCA GCCCGGTCAC CGGCATCGGC GCCGACTCCT CCGGTGTCCG GACGGTCCGG GTGGCCGGCG GGCAGGAGGT CCGGGTCGGT CGGGCGGTGG TCGCCGGCGG CCACGTCGCG AAGCTCGGTG CGCTGCTCGA GGGCCGTGAG CCCACCCCCG ACCTGGTCGC CGCCCGGGAG GCCTGGCGCC CCGGCCTGAG CGTGCTCGCG GTGCACGCGG CGCTGCGCGC GGACCTCGGC TTCGGCCCGG ACCGCATCCC CGCGGCCGCC GCCGGGCTCG GCACCACCGG CGGGATGCTG CGGCACCTGG AGCGCTTCGC CGTCGGCGAG CCCGACGCGG ACGACCCCTG GCTGCTGGTG GTGAACCAGA CCGCGGTGGA CCCCACCCGG GCGCCCGACG GCGGCGGGAC GTTCAAGATC CTGACGATCG CGCCGTACGC CCTCTCCGGC GGACGGGCCT GGGCCGACGT CAAGGACGAG TACGGCGAGC GCCTGCTCGA GCTGGTCCGG CGCCGCTCGC ACGGGCTCGC GCCGGCGGAC CTCCTCGAGC TGAGCACCGA GTCGCCGATC GACGTGGCCG CGCACAACCC GCAGAACATC GGCGGCTCCT GCCACGGCGG GGAGTTCTGG CTCGACGGCA GGTACGACGG CGAGGTGGTC GCGGGCTGGC AGCGCTACGA CACCGACGTG CCGGGGCTGT TCCTCACCGG CGCGACCGTC CACCCCGGCG GCTCGGTCTC GGGCCGCCCC GGCCGCAACG CCGCCCGCGC CGTGCTCACC GGCCTCGGCC TCGACCCGCT GCAGGTGATG GGCCCCGGCT GA
|
Protein sequence | MTSQPVPDLP AQAEVVVVGA GHNSLIAAAY LARAGLEVLV LEANETPGGN TRTEQLTLPG FAHDSCSSAH VLIQNNPLIR DDELGLLADH GLEYLATDPA VVMPQQDGDV LVMHRDLEGT AAEIARWSSA DARAFEELVG QWRGGLSAAH GRWSSHLPQP DDDASRRYLA LRRRSAWDVV HEQFTHPVIR SFVLWLAMAT IQDPRRPGTG FLPSSLVAGR LDFGWSTPVG GSQALPDALV RLIEKHGGRV VCSSPVTGIG ADSSGVRTVR VAGGQEVRVG RAVVAGGHVA KLGALLEGRE PTPDLVAARE AWRPGLSVLA VHAALRADLG FGPDRIPAAA AGLGTTGGML RHLERFAVGE PDADDPWLLV VNQTAVDPTR APDGGGTFKI LTIAPYALSG GRAWADVKDE YGERLLELVR RRSHGLAPAD LLELSTESPI DVAAHNPQNI GGSCHGGEFW LDGRYDGEVV AGWQRYDTDV PGLFLTGATV HPGGSVSGRP GRNAARAVLT GLGLDPLQVM GPG
|
| |