Gene Noca_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4444 
Symbol 
ID4596963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4698265 
End bp4699836 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content75% 
IMG OID639779055 
ProductFAD dependent oxidoreductase 
Protein accessionYP_925628 
Protein GI119718663 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCGC AGCCGGTCCC GGACCTGCCC GCGCAGGCCG AGGTGGTCGT CGTCGGCGCC 
GGCCACAACT CGCTGATCGC CGCGGCGTAC CTGGCCCGAG CGGGTCTCGA GGTGCTGGTG
CTCGAGGCGA ACGAGACGCC GGGCGGCAAC ACCCGCACCG AGCAGCTGAC CCTGCCGGGC
TTCGCCCACG ACTCGTGCAG CAGCGCGCAC GTGCTGATCC AGAACAACCC GCTGATCCGC
GACGACGAGC TCGGCCTGCT CGCCGACCAC GGCCTGGAGT ACCTCGCGAC CGACCCGGCG
GTGGTGATGC CCCAGCAGGA CGGCGACGTG CTCGTGATGC ACCGCGACCT GGAGGGCACC
GCCGCCGAGA TCGCCCGGTG GTCCAGCGCC GACGCGCGTG CTTTCGAGGA GCTCGTGGGC
CAGTGGCGCG GCGGGCTCTC GGCCGCGCAC GGGCGCTGGA GCTCGCACCT GCCCCAGCCC
GACGACGACG CGAGCCGGCG TTACCTCGCC CTGCGCCGCC GCAGCGCCTG GGACGTCGTG
CACGAGCAGT TCACCCATCC GGTCATCCGC TCCTTCGTGC TCTGGCTGGC GATGGCCACG
ATCCAGGATC CCCGCCGACC CGGCACCGGC TTCCTGCCAT CCTCCCTGGT CGCCGGCCGC
CTCGACTTCG GATGGAGCAC ACCGGTCGGC GGCAGCCAGG CGCTGCCGGA CGCGCTCGTC
CGGCTGATCG AGAAGCACGG CGGCCGCGTG GTCTGCTCCA GCCCGGTCAC CGGCATCGGC
GCCGACTCCT CCGGTGTCCG GACGGTCCGG GTGGCCGGCG GGCAGGAGGT CCGGGTCGGT
CGGGCGGTGG TCGCCGGCGG CCACGTCGCG AAGCTCGGTG CGCTGCTCGA GGGCCGTGAG
CCCACCCCCG ACCTGGTCGC CGCCCGGGAG GCCTGGCGCC CCGGCCTGAG CGTGCTCGCG
GTGCACGCGG CGCTGCGCGC GGACCTCGGC TTCGGCCCGG ACCGCATCCC CGCGGCCGCC
GCCGGGCTCG GCACCACCGG CGGGATGCTG CGGCACCTGG AGCGCTTCGC CGTCGGCGAG
CCCGACGCGG ACGACCCCTG GCTGCTGGTG GTGAACCAGA CCGCGGTGGA CCCCACCCGG
GCGCCCGACG GCGGCGGGAC GTTCAAGATC CTGACGATCG CGCCGTACGC CCTCTCCGGC
GGACGGGCCT GGGCCGACGT CAAGGACGAG TACGGCGAGC GCCTGCTCGA GCTGGTCCGG
CGCCGCTCGC ACGGGCTCGC GCCGGCGGAC CTCCTCGAGC TGAGCACCGA GTCGCCGATC
GACGTGGCCG CGCACAACCC GCAGAACATC GGCGGCTCCT GCCACGGCGG GGAGTTCTGG
CTCGACGGCA GGTACGACGG CGAGGTGGTC GCGGGCTGGC AGCGCTACGA CACCGACGTG
CCGGGGCTGT TCCTCACCGG CGCGACCGTC CACCCCGGCG GCTCGGTCTC GGGCCGCCCC
GGCCGCAACG CCGCCCGCGC CGTGCTCACC GGCCTCGGCC TCGACCCGCT GCAGGTGATG
GGCCCCGGCT GA
 
Protein sequence
MTSQPVPDLP AQAEVVVVGA GHNSLIAAAY LARAGLEVLV LEANETPGGN TRTEQLTLPG 
FAHDSCSSAH VLIQNNPLIR DDELGLLADH GLEYLATDPA VVMPQQDGDV LVMHRDLEGT
AAEIARWSSA DARAFEELVG QWRGGLSAAH GRWSSHLPQP DDDASRRYLA LRRRSAWDVV
HEQFTHPVIR SFVLWLAMAT IQDPRRPGTG FLPSSLVAGR LDFGWSTPVG GSQALPDALV
RLIEKHGGRV VCSSPVTGIG ADSSGVRTVR VAGGQEVRVG RAVVAGGHVA KLGALLEGRE
PTPDLVAARE AWRPGLSVLA VHAALRADLG FGPDRIPAAA AGLGTTGGML RHLERFAVGE
PDADDPWLLV VNQTAVDPTR APDGGGTFKI LTIAPYALSG GRAWADVKDE YGERLLELVR
RRSHGLAPAD LLELSTESPI DVAAHNPQNI GGSCHGGEFW LDGRYDGEVV AGWQRYDTDV
PGLFLTGATV HPGGSVSGRP GRNAARAVLT GLGLDPLQVM GPG