Gene Noca_4441 details

Gene Information

• Locus tag: Noca_4441
• ID: 4596960
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 4694141
• End bp: 4695952
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 639779052
• Product: ABC transporter related
• Protein accession: YP_925625
• Protein GI: 119718660
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component; [COG4177] ABC-type branched-chain amino acid transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCGA TCTGGCTGGG CCGGGCGGTC GCCCTCGCCG CGGGCGTCCT GCTCGTCGCC 
TACCCGATGC TCAGCGACGA CATCTACTAC CAGAACATGA TCATCCTGTC GCTGATCTTC 
GCGGTCGGTG CCAGCGGGCT GAACATCATC TCCGGCTTCG CCGGCTACAT CTCCCTGGGC 
CAGGGCGCGT TCCTCGGCCT CGGCGGCTAC ACCATCGGCG TGCTCGCGGG GAGGTACCCC 
GACGCCAGCC CGTGGCTGTG GGTGCCGCTC GGCGGGATCG TGGCGGCGGG CGTGGCGCTG 
ATCCTCGGGT TCGTGTCGCT GCGCTCCCGC GGCCCGGCGT TCGTGATCAT CACCGTCGCG 
TTCCTGTTCC TGGTGCAGGT GATCGCGGTC AACTGGGTGT CGTTGACCAA CGGCACCACC 
GGTCTGACGC TGCCGCTGCC CACCTGGGAC CGCGACATCA TGAACTGGCC GTTCTACTAC 
GTGCTGGTGG CCATCTTGGC CCTCCAGCTG CTGATGACCT GGTGGATCCG CCGCACCAAG 
CTCGGGATGG GCCTGATCGC GATTCGCGAG GACGAGACCA AGGCCGCGAC GATCGGCATC 
AACCTGCCGG TGCAGAAGAT CATCGCCTTC ATGGCCAGCG CCCTCTTCGT GGGGATGGCC 
GGCGCGGTCT ATGGCTACTA CCTGACCTTC ATCGACCCGC GCGGCATGTT CAGCATCCTG 
ATCAGCGTCC AGCTGGTCCT CTCGATGCTG ATCGGCGGCA AGGCCACCCT GTGGGGCCCG 
GTGATCGGCG CGTTCCTGGT CGAGTGGCTC AACGAGATGG CCAACAACGA CTGGGGCGGC 
GGCAATACCC GGCTGTTCCT GTTCGGCGGG CTGCTGATGG CGGTGGTGAT CTTCCTGCCC 
AAGGGCATCA TCCCGGCGAT CGAGTCGGCG CTCAGCTGGC GCCGTACCCG CGGCAAGGCC 
GGCCTGGTCG GCGCCCGGAT CGGCACCGGC GGCAGCCTGG CCTCGATCAC CGACCGGGTG 
CACCTGGTCG ACCGCAGCAA GATCCCGGAC CGGGCCCTGC TCGAGGTCAA GAACCTCAAG 
CGCCACTTCG GCGGCGTGAA GGCGGTCGAC GGTGCGTCGT TCGCCGTGCC GGAGGGCTCG 
ATCACCGGCC TGATCGGGCC GAACGGCTCG GGCAAGACCA CGCTGTTCAA CCTGATCGAC 
GACACGATCC GTGCCGAGTC CGGTGAGATC TGGCTCGAAG GACGGCGCAT CGACGGGATG 
CGGTCCTGGC AGCGCGCGCA CCTCGGCCTG GGCCGCACCT TCCAGATCAC CCGGCTGTTC 
CGGGAGATGA CCGTGCTGGA GAACGTCGTC GCGGTGCAGC GCAGGTTCTC GATCGCCCAG 
CTCGGCCGGA TCGCGGTGAG CGGCGCCGAG GCCAAGGCCG CCGAGGAGCT CCTGGAGTTC 
GTCGGCATGC GGGCCTTCCG GGACCAGAAG GCGCAGGCGC TGTCCTACGG CCAGCAGAAG 
CTTGTCGAGC TGGCCCAGAT CCTGATGCTC GATCCCAAGC TGATCCTGCT CGACGAGCCG 
GCCGGTGGCA TCAACCCGGT GCTCATCGAG CGGATGGGCG AGATGATCCG GGAGCTGAAC 
TCCTACGGGA AGACGTTCCT GATCGTCGAG CACAACATGC CGTTCGTGCT GGGGCTGTGC 
GACCCGATCC ACGTGCTCGC CCGGGGCCGG ACGATGGCGT CGGGGACGCC GGAGGAGATC 
CAGCGCGACC CCGCCGTGAT CGACGCCTAC CTGGGCGACG ACTTCGTCCT CGAGGAGAAG 
GTGGCCCCGT GA 

 

Protein sequence

MKPIWLGRAV ALAAGVLLVA YPMLSDDIYY QNMIILSLIF AVGASGLNII SGFAGYISLG 
QGAFLGLGGY TIGVLAGRYP DASPWLWVPL GGIVAAGVAL ILGFVSLRSR GPAFVIITVA 
FLFLVQVIAV NWVSLTNGTT GLTLPLPTWD RDIMNWPFYY VLVAILALQL LMTWWIRRTK 
LGMGLIAIRE DETKAATIGI NLPVQKIIAF MASALFVGMA GAVYGYYLTF IDPRGMFSIL 
ISVQLVLSML IGGKATLWGP VIGAFLVEWL NEMANNDWGG GNTRLFLFGG LLMAVVIFLP 
KGIIPAIESA LSWRRTRGKA GLVGARIGTG GSLASITDRV HLVDRSKIPD RALLEVKNLK 
RHFGGVKAVD GASFAVPEGS ITGLIGPNGS GKTTLFNLID DTIRAESGEI WLEGRRIDGM 
RSWQRAHLGL GRTFQITRLF REMTVLENVV AVQRRFSIAQ LGRIAVSGAE AKAAEELLEF 
VGMRAFRDQK AQALSYGQQK LVELAQILML DPKLILLDEP AGGINPVLIE RMGEMIRELN 
SYGKTFLIVE HNMPFVLGLC DPIHVLARGR TMASGTPEEI QRDPAVIDAY LGDDFVLEEK 
VAP