| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4425 |
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| Symbol | |
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| ID | 4596944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4679181 |
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| End bp | 4680110 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 639779036 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_925609 |
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| Protein GI | 119718644 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.205443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCC ACACCTGGCG GGACTGGTCC TGCACGGTCC GCGTCGTGGT CGGCGGGGAC
GACCCGGTGC CGGACCGGGT GAGCGACGAC GCCGCCCGGA TCGTCCGCGA GCTGATGGGC
GAGGTCGAGG CGGCGGTCAG CCGGTTCCGC AGCGACTCCG AGCTGGAGCG GGTCAACGCC
GCCGCACCCC GGCTGCTGCC CGTCGGGCCG CTCACCCAGA CCCTCGTCGA GGCCGCGCTC
GACGCCGCCC GGCGTACCGA CGGTGCCGTC GACCCGACGA TCGGCGGCCA GCTGGTGGCG
CTCGGCTACG ACGCCGATCT CGACGTGGTC CGCGAGCGCC CGGGTCCGAC CGGGCCGACC
GCCCGGGCGC CCCGGGCTGG CGCGGACTGG ACCCGGGTGG TCGTCGACCA CGACCTCGGC
CGGGTCGGCG TCGCCCGGGG GCTGCGCCTC GACCTGGGGG CGACGGCGAA GGCGTGGACG
GCCGACGAGG CCGCCCGCCG GGTCTCCGCC CGGCTCCGCC GCCCCGCGCT CGTGGAGATC
GGCGGGGACG TCGCTGTCGC CGGCTCGGCC GGGTCGCCGT GGCGGGTCCG GGTGGCGGAG
GCGCCGGACC GCCCCGGCGA GGTCGTCGGC CTCACCCACG GCGGCCTGGC GACGTCCTCG
AGCACGGTGC GCCGCTGGCG CACCGGTGCC GGTCCCGCCC ACCACGTCGT CGACCCCGCG
ACCGGGCGCC CCACCGACGG GCCGTTCCGG ACCGCCACGG TCTGGGCGCC GTCCGCCGTC
GAGGCCAACA CGTTCAGCAC CGCCGCGCTG GTCTGGGGCG AGGCCGCGGC CGCCCGGCTC
GCGCTCGCCG GCGTCGACGC CCGCCTGGTC GACCGGGCCG GCGCGGTCCG GCTGGTCGGC
TCCTGGCCGA CGGAGGGGAG GGCGGCATGA
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| Protein sequence | MTGHTWRDWS CTVRVVVGGD DPVPDRVSDD AARIVRELMG EVEAAVSRFR SDSELERVNA
AAPRLLPVGP LTQTLVEAAL DAARRTDGAV DPTIGGQLVA LGYDADLDVV RERPGPTGPT
ARAPRAGADW TRVVVDHDLG RVGVARGLRL DLGATAKAWT ADEAARRVSA RLRRPALVEI
GGDVAVAGSA GSPWRVRVAE APDRPGEVVG LTHGGLATSS STVRRWRTGA GPAHHVVDPA
TGRPTDGPFR TATVWAPSAV EANTFSTAAL VWGEAAAARL ALAGVDARLV DRAGAVRLVG
SWPTEGRAA
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