Gene Noca_4374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4374 
Symbol 
ID4596892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4624060 
End bp4624794 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content75% 
IMG OID639778984 
Producthypothetical protein 
Protein accessionYP_925558 
Protein GI119718593 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.04339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CCGTCGCCGG CGCCACCGGG CTCATCGGAG CCCAGCTCAC CACGCTCGCC 
CGGGAGGAGG GGCACGACGT CGTCGAGCTC GCCCGGTCGA CGGGGTTCGA CCTGCTCCGG
TCCGACGGCG CCGACCGGCT CCGGGAGGCG CTGACCGGGG TCGAGGCCGT CGTGGACGTG
ACCTCGAGCG CCGACCCGAC CGGGGTCGAG ACGTTCTTCA CCACCGTGGC CCGCAACCTG
GGCCAGGCGG CCACCGGGGC CGGGGTGGCC CGCACCGTCG TCCTCTCGAT CGTGGGCGTC
GACCGCAGCC CGGACTTCGA CTACTACGTC GCCAAGCTCG CCCACGAGCG GGCCACCCGC
GAGCACGCGC CCGGCCCGGT CGTGTTGCGG GCCACGCAGT TCCACGAGTT CGCGGGCCAG
ATGCTGGCCT GGAACACCCA CGACGGCGTC GTCCAGGTCA TGGACGTCCC CAGCCAGCCG
GTGGCGACCG GCGAAGTCGT ACGCGTGCTG CTCGACCTGG CGACCGGGGC ACTCACCGGT
GACCAGGACC TCGCCGGCCC GCGCCCCGAA CGGCTGGTCG ACCAGGTGCG GGCCCTGGTC
GACCGCGCCG GCTCGGACGT CACCGTCGAG GCGGCGCCGG CCGCGCCGAG CATGGCCGAC
GGGTCGATGC TGCCGGGCCC CGGCGCGCTG CTGCGCGGAC CCGACTGGGC CACCTGGCTG
GACCAGCAGG CCTGA
 
Protein sequence
MKIAVAGATG LIGAQLTTLA REEGHDVVEL ARSTGFDLLR SDGADRLREA LTGVEAVVDV 
TSSADPTGVE TFFTTVARNL GQAATGAGVA RTVVLSIVGV DRSPDFDYYV AKLAHERATR
EHAPGPVVLR ATQFHEFAGQ MLAWNTHDGV VQVMDVPSQP VATGEVVRVL LDLATGALTG
DQDLAGPRPE RLVDQVRALV DRAGSDVTVE AAPAAPSMAD GSMLPGPGAL LRGPDWATWL
DQQA