| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4355 |
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| Symbol | |
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| ID | 4596873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4603808 |
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| End bp | 4604965 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639778965 |
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| Product | succinyldiaminopimelate aminotransferase |
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| Protein accession | YP_925539 |
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| Protein GI | 119718574 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.339813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCCC ACCGCCTCGA GGGGATCCCG CCCACGATCT TCACGGAGAT GTCGGCGCTC
GCCGTCCGCA CCCGGTCGGT CAACCTCGGC CAGGGCTTCC CCGACGTGGA CGGCCCACCG
GCGGTGATCG CGCGCGCGGT GGCCGCGCTC GAGGGCGGTC ACAACCAGTA CGCGCCGGGA
CCCGGCGTCC CGGCGCTGCG CCAGGCGATC GCCCGGCACC AGCTGCGCCA CTACGGCGTC
GAGCTCGACC CGGACGCCCA GGTGGTGGTC ACCACGGGGT GCACCGAGGG GATCGCCGCG
GCGCTGCTCG GGCTGGTGGA CCCCGGCGAC GAGGTGGTCG TGCTCGAGCC GTACTACGAC
TCCTACACGG CGATGATCCA GATGGCGGGC GGCGTACGCC GTCCCGTCAC ACTGCGGGCG
CCCGGGTTCC GCCTCGACCC CGACGAGCTG CGGGCGGCGG TCACGCCGCG GACCCGGTTC
GTGCTGCTGA ACTCCCCGCA CAACCCCACC GGGACGGTGC TCACCCGCGC CGAGCTGCAG
GCGGTCGCGG ACGTCGCCAT CGAGCACGAC CTGGTGGTGG TCACCGACGA GGTCTACGAG
CACCTCGTGT ACGACGACCA CGAGCACGTC CCGCTCGCGA CGCTGCCGGG CATGTTCGAG
CGGACGCTCA CCCTCTCCAG CGCCGGGAAG TCCTACTCGT TCACCGGCTG GAAGGTCGGC
TGGGCCACCG GGCCCGCCGA GCTCGTCGGG GCGGTGCTGG CGGCCAAGCA GTGGCTGACC
TTCACCTCGG GATCGCCGCT GCAGCCGGCG GTCGCCTACG CGCTCGACGA GGAGCCGGGC
TTCCCCACCG AGCTGGCCGC GGAGCTGCGC GCCAAGCGCG ACCTGCTCTG CGATGGGCTG
GCTCGGGTCG GGCTGGATGT CCGGGTGCCC GAGGGCACCT ACTTCGCCAG CACCGACATC
TCCGCCCTCG GCTGGCCGGA CGCCCGGTCC TTCTGCCTCG CCCTGCCCGA GCGCGCCGGC
GTGGTCGCCA TCCCGACCCA GGCCTTCTAC GACTCCGACG CCGGACGGCA CCTGGTCCGC
TGGGCGTTCT GCAAGGATTC CGAGGTCATC GAGGAGGGTC TGCGCCGCCT CGCGGCCGCC
GACCTCACGG CCTCCTGA
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| Protein sequence | MLAHRLEGIP PTIFTEMSAL AVRTRSVNLG QGFPDVDGPP AVIARAVAAL EGGHNQYAPG
PGVPALRQAI ARHQLRHYGV ELDPDAQVVV TTGCTEGIAA ALLGLVDPGD EVVVLEPYYD
SYTAMIQMAG GVRRPVTLRA PGFRLDPDEL RAAVTPRTRF VLLNSPHNPT GTVLTRAELQ
AVADVAIEHD LVVVTDEVYE HLVYDDHEHV PLATLPGMFE RTLTLSSAGK SYSFTGWKVG
WATGPAELVG AVLAAKQWLT FTSGSPLQPA VAYALDEEPG FPTELAAELR AKRDLLCDGL
ARVGLDVRVP EGTYFASTDI SALGWPDARS FCLALPERAG VVAIPTQAFY DSDAGRHLVR
WAFCKDSEVI EEGLRRLAAA DLTAS
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