Gene Noca_4352 details

Gene Information

• Locus tag: Noca_4352
• ID: 4596870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: -
• Start bp: 4601675
• End bp: 4602334
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 639778962
• Product: tRNA/rRNA methyltransferase (SpoU)
• Protein accession: YP_925536
• Protein GI: 119718571
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0566] rRNA methylases

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCACG GGCCACCCGA GGTCGGCGTC GGCCCCTGGC GGGGGGAGTG GCCGACCGGG 
GCGCAGTACG ACGCCGCGCT GCTCGCGGCC GGCGACCGGC GCAACGTGGT CGACCGCTAC 
CGGTACTGGT CGGTCGAGGC GATCGTCGCC GACCTGGACA CCCGGCGGCA CGACTTCCAC 
GTGGCCATCG AGAACTGGCA GCACGACTTC AACATCGGGA CGATCGTGCG CACCGCGAAC 
GCCTTCTTGG CGGCGGAGGT GCACATCGTG GGGAACCGGC GGTGGAACCG CCGCGGCGCG 
ATGGTGACCG ACCGGTACCA GCACGTCCGG CACCACCCGA CGGTCGAGGC GCTGGCCGGC 
TACCTGCACG AACACCCCGG CGGCCCGGTC GCGCTGCACG GCATCGACAA CCTGCCGGGC 
TCGGCCCACC TGGAGACGAC CGAGGTGCCG CGCCGGGTGT GCTTCCTGTT CGGGCAGGAG 
GGGCCGGGCC TCTCCGAGAC CGCCCGGGAG GCCTGCGACG GCACGTTCTC GATCGCGCAG 
TTCGGCTCGA CCCGCTCCAT CAACGCCTCC GCGGCCGCCG CGATCGCCAT GCACGCGTGG 
GTGCGGGCGT ACGCCGACCT GTCCGGGGGC CGGTCGGACG GCGGGGTCTG GCGCGGCTGA 

 

Protein sequence

MPHGPPEVGV GPWRGEWPTG AQYDAALLAA GDRRNVVDRY RYWSVEAIVA DLDTRRHDFH 
VAIENWQHDF NIGTIVRTAN AFLAAEVHIV GNRRWNRRGA MVTDRYQHVR HHPTVEALAG 
YLHEHPGGPV ALHGIDNLPG SAHLETTEVP RRVCFLFGQE GPGLSETARE ACDGTFSIAQ 
FGSTRSINAS AAAAIAMHAW VRAYADLSGG RSDGGVWRG