Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4330 |
Symbol | |
ID | 4596848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4579841 |
End bp | 4581298 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639778940 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_925514 |
Protein GI | 119718549 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCC CGCACCTCCG GACCCCGCGC ACGCTGCTGC GCCGCGCGCT CGTCACGGCC ACCGGTGGCC TGCTCGCCGT GACCACGGTC GCCGCGCTCG GCACCGGTGG CCCGGCCGAC GCGGCCGGCA CCGCGCCGAC CGCCACGTCG ACCACCACGT CGACCACCAC GTCGACCGCT GCGAAGCCGG CCGCGAAGCG GGCCGCCAAC CCGGTCACGC CGGGCGACTT CACCGGGTTC GGCTTCGACC AGTGCCACAC GCCGGAGCAG CGCAAGATGA ACCGCTGGCT GCAGAGCTCG CCGTTCCTCG CGGTCGGCAT CTACATCTCC GGCGACTCCC GCGCCTGCCG CGAGCAGCCG GAGCTGACCC CCACCTGGGT CCGCACCCAG CTCGCGAAGG GCTGGCGGCT GCTGCCGATC ACGCTCGGCC CGCAGGCCTC CTGCCAGCCG CGGTTCCCGC GGTACGGCGA CGACGAGACG ATCATCCCGC GCCCGGGCGC CAACGGCGGG TACAGCAAGG CCAAGAAGCA GGGCAACGCC GAGGCCGTCA AGAGCGTCGG CGTCGCCGCG GACCTGGGCA TCGCGCCGGG CAGCACGCTC TGGTACGACC TCGAGGGCTT CGACCTGCGC AACACCAGGT GCCGGGAGTC CGCGCTCGCC TTCCTCAGCG GCTGGACCTG GCAGATCCAC CGGCTCGGCT ACGCCTCGGG CGTGTACTCC GGCGCCAGCT CCGGCATCAA GATGCTCGAC GACGCGCGGG TGAACCGGCC CGGCCAGGTC GTGCTGCCCG ACCAGATCTG GCTGGCCCGC TGGGACGGCA AGGCGAACAC CTCCTCGTCG TACCTCCGCG AGGACGGGTG GCGACCGCAC GCCCGGATCA AGCAGTACCA GGGCGGGCAC GACGAGACGT GGGGCGGCGT GACGATCAAC ATCGACCGCA ACTTCCTCGA CGTCGGCCGG GGCATGGTCG CGCCCTCGGA GACCCACTGC GGCGGGGTGC GGGTCAACTT CCGCAACTAC GAGACGCTGC GGCCGCCGAC GGAGACGACC ACGCCCGGGC CGGGCCAGGT CAGCGCCCTG CAGTGCCTGC TGACCGAGCA GGAGTTCTAC GGCGGCGCGA TCAACGGCCG CTGGACCAAG GCCACCGTCA AGGCGATCCA GGCCTGGCAG GCCGGGCACG ACATGGCGCA GCGCGAGGTG TGGTCGCGCA AGAACTGGAT GTCGTTGCTG TCGGCCGGCG AGACCCCGGT GCTCAAGCTC GGCTCGACCG GGCTCGCCGT ACGGCGCCTG CAACGCACGC TCAACGCCGC CGGCGTCTCG GACTCGGTGA GGATGAACGG GATGTTCAAG GCCGAGACGG CGGACGCGGT GCGGGCCTAC CAGCAGCAGG TCGGCACCGA GGTCTCCGGC GTGGCGGGGT ACCGGACCTG GCGGGCGCTC TCCGCGGGGC GGCTCTGA
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Protein sequence | MSRPHLRTPR TLLRRALVTA TGGLLAVTTV AALGTGGPAD AAGTAPTATS TTTSTTTSTA AKPAAKRAAN PVTPGDFTGF GFDQCHTPEQ RKMNRWLQSS PFLAVGIYIS GDSRACREQP ELTPTWVRTQ LAKGWRLLPI TLGPQASCQP RFPRYGDDET IIPRPGANGG YSKAKKQGNA EAVKSVGVAA DLGIAPGSTL WYDLEGFDLR NTRCRESALA FLSGWTWQIH RLGYASGVYS GASSGIKMLD DARVNRPGQV VLPDQIWLAR WDGKANTSSS YLREDGWRPH ARIKQYQGGH DETWGGVTIN IDRNFLDVGR GMVAPSETHC GGVRVNFRNY ETLRPPTETT TPGPGQVSAL QCLLTEQEFY GGAINGRWTK ATVKAIQAWQ AGHDMAQREV WSRKNWMSLL SAGETPVLKL GSTGLAVRRL QRTLNAAGVS DSVRMNGMFK AETADAVRAY QQQVGTEVSG VAGYRTWRAL SAGRL
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