Gene Noca_4330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4330 
Symbol 
ID4596848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4579841 
End bp4581298 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content73% 
IMG OID639778940 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_925514 
Protein GI119718549 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGCC CGCACCTCCG GACCCCGCGC ACGCTGCTGC GCCGCGCGCT CGTCACGGCC 
ACCGGTGGCC TGCTCGCCGT GACCACGGTC GCCGCGCTCG GCACCGGTGG CCCGGCCGAC
GCGGCCGGCA CCGCGCCGAC CGCCACGTCG ACCACCACGT CGACCACCAC GTCGACCGCT
GCGAAGCCGG CCGCGAAGCG GGCCGCCAAC CCGGTCACGC CGGGCGACTT CACCGGGTTC
GGCTTCGACC AGTGCCACAC GCCGGAGCAG CGCAAGATGA ACCGCTGGCT GCAGAGCTCG
CCGTTCCTCG CGGTCGGCAT CTACATCTCC GGCGACTCCC GCGCCTGCCG CGAGCAGCCG
GAGCTGACCC CCACCTGGGT CCGCACCCAG CTCGCGAAGG GCTGGCGGCT GCTGCCGATC
ACGCTCGGCC CGCAGGCCTC CTGCCAGCCG CGGTTCCCGC GGTACGGCGA CGACGAGACG
ATCATCCCGC GCCCGGGCGC CAACGGCGGG TACAGCAAGG CCAAGAAGCA GGGCAACGCC
GAGGCCGTCA AGAGCGTCGG CGTCGCCGCG GACCTGGGCA TCGCGCCGGG CAGCACGCTC
TGGTACGACC TCGAGGGCTT CGACCTGCGC AACACCAGGT GCCGGGAGTC CGCGCTCGCC
TTCCTCAGCG GCTGGACCTG GCAGATCCAC CGGCTCGGCT ACGCCTCGGG CGTGTACTCC
GGCGCCAGCT CCGGCATCAA GATGCTCGAC GACGCGCGGG TGAACCGGCC CGGCCAGGTC
GTGCTGCCCG ACCAGATCTG GCTGGCCCGC TGGGACGGCA AGGCGAACAC CTCCTCGTCG
TACCTCCGCG AGGACGGGTG GCGACCGCAC GCCCGGATCA AGCAGTACCA GGGCGGGCAC
GACGAGACGT GGGGCGGCGT GACGATCAAC ATCGACCGCA ACTTCCTCGA CGTCGGCCGG
GGCATGGTCG CGCCCTCGGA GACCCACTGC GGCGGGGTGC GGGTCAACTT CCGCAACTAC
GAGACGCTGC GGCCGCCGAC GGAGACGACC ACGCCCGGGC CGGGCCAGGT CAGCGCCCTG
CAGTGCCTGC TGACCGAGCA GGAGTTCTAC GGCGGCGCGA TCAACGGCCG CTGGACCAAG
GCCACCGTCA AGGCGATCCA GGCCTGGCAG GCCGGGCACG ACATGGCGCA GCGCGAGGTG
TGGTCGCGCA AGAACTGGAT GTCGTTGCTG TCGGCCGGCG AGACCCCGGT GCTCAAGCTC
GGCTCGACCG GGCTCGCCGT ACGGCGCCTG CAACGCACGC TCAACGCCGC CGGCGTCTCG
GACTCGGTGA GGATGAACGG GATGTTCAAG GCCGAGACGG CGGACGCGGT GCGGGCCTAC
CAGCAGCAGG TCGGCACCGA GGTCTCCGGC GTGGCGGGGT ACCGGACCTG GCGGGCGCTC
TCCGCGGGGC GGCTCTGA
 
Protein sequence
MSRPHLRTPR TLLRRALVTA TGGLLAVTTV AALGTGGPAD AAGTAPTATS TTTSTTTSTA 
AKPAAKRAAN PVTPGDFTGF GFDQCHTPEQ RKMNRWLQSS PFLAVGIYIS GDSRACREQP
ELTPTWVRTQ LAKGWRLLPI TLGPQASCQP RFPRYGDDET IIPRPGANGG YSKAKKQGNA
EAVKSVGVAA DLGIAPGSTL WYDLEGFDLR NTRCRESALA FLSGWTWQIH RLGYASGVYS
GASSGIKMLD DARVNRPGQV VLPDQIWLAR WDGKANTSSS YLREDGWRPH ARIKQYQGGH
DETWGGVTIN IDRNFLDVGR GMVAPSETHC GGVRVNFRNY ETLRPPTETT TPGPGQVSAL
QCLLTEQEFY GGAINGRWTK ATVKAIQAWQ AGHDMAQREV WSRKNWMSLL SAGETPVLKL
GSTGLAVRRL QRTLNAAGVS DSVRMNGMFK AETADAVRAY QQQVGTEVSG VAGYRTWRAL
SAGRL