Gene Noca_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4327 
Symbol 
ID4596845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4577207 
End bp4577755 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content72% 
IMG OID639778937 
Productregulatory protein, TetR 
Protein accessionYP_925511 
Protein GI119718546 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.809003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGCCG ATGCCAGGCG CAACTACGAC CGGATCGTCG AGGTCGCGCG GGAGGTCTTC 
CGCGAGCAGG GGTACGACGC CTCGCTCGAC GAGATCGCCA AGCGCGCGGG CGTCGGCCCC 
GGCACCCTCT ACCGGCACTT CCCGAAGCGG GAGAACCTGC TCGACGCGGT CATGCAGTCC 
TGGGTCGACC GGGTGAACGA CACCGCCGAC AAGGCGATGG CGCGCGAGGG CTCGGCCCGC 
GACGTGCTGC TGGGCTGGTT CGAGGACTAC GTCCGGCTGA TCAGCGTGCA CCGAGGGGGC 
CCGGCGAAGA TCACCTCCGC GATGGGCGAC CCCGACTCCC CGATCATCAC CAAGTGCCAG 
GTGCTGGCCG GGGCCAACGA CCGGGTGATC GAGCGGCTGC GCGCCGACGG CGCCCTGCGT 
GCGGACATCG AGACCGTCCA GGTGTGCCGC CTGGTCGGCG GCGTCGCGAC CGTCGCCGAC 
CAGGGCGACC TGGACCCCGA CGCCGTCCGC CCGATGCTCG AGGTCGTCGC CGACGGCCTG 
CTGCGCTAG
 
Protein sequence
MRADARRNYD RIVEVAREVF REQGYDASLD EIAKRAGVGP GTLYRHFPKR ENLLDAVMQS 
WVDRVNDTAD KAMAREGSAR DVLLGWFEDY VRLISVHRGG PAKITSAMGD PDSPIITKCQ 
VLAGANDRVI ERLRADGALR ADIETVQVCR LVGGVATVAD QGDLDPDAVR PMLEVVADGL 
LR