| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4315 |
|---|
| Symbol | |
|---|
| ID | 4596833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4562133 |
|---|
| End bp | 4563221 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639778925 |
|---|
| Product | phosphoribosylformylglycinamidine cyclo-ligase |
|---|
| Protein accession | YP_925499 |
|---|
| Protein GI | 119718534 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAGC CCGTTCCTGG CAACGCCTAC GCCGCCGCCG GCGTGTCCAT CGAGGCCGGT
GACAAGGCCG TCGAGCTGAT GAAGGTGTGG GTCGAGAAGG CTCGGCGGCC GGAGATGATC
GGCGGGATCG GTGGGTTCGC GGGCCTGTTC GACGCCTCGG CCCTGAAGTC CTACACCCGG
CCCCTGCTCG CCACGTCCGC CGACGGCGTC GGCACCAAGG TCGCGATCGC CCAGGCTCTC
GACAAGCACG ACTCGATCGG CTTCGACCTG GTCGGGATGC TGGTCGACGA CCTGGTCGTC
TGCGGGGCCG AGCCGCTGTT CCTCACCGAC TACATCGCGA CCGGCCGGGT GCTCCCCGAG
CGGATCGCCG CGATCGTGAA GGGCATCGCC GAGGCCTGCA TCGAGGCCGG CTGTGCGCTG
CTCGGCGGCG AGACCGCCGA GCATCCCGGG CTGCTCGGAC CGGACGAGTA CGACGTCGCG
GGCTCGACCA CGGGCGTCGT CGACGCGGAC GACCTGCTCG GCCCCGGCCG GGTGCGTCCG
GGCGACGCGG TCATCGCGAT GGAGTCCTCC GGGCTGCACT CCAACGGCTA CTCGCTGGTG
CGGCACGTGC TGCTCGCCCC GACCGACGCC GGCGGCGCCG GATGGACCCT CGACCGGCAG
GTCGACGAGC TCGGTCGCAC CCTCGGGGAG GAGCTGCTCG AGCCGACCCG GATCTACACC
CGGGCGTGCC TGGCCCTGGC CCGCGGGACC CGCACCCACG CGATGTCACA CATCACCGGC
GGCGGCCTGG CCGCCAACCT CGAGCGGGTG CTCCCCGTGG AGCTCGCCGC GACCCTGGAC
CGCCGTACCT GGACGCCCGC GCCGGTCTTC GACCTGGTCC GCCGGGTCGG CGCCGTCCCC
CAGCCCGACC TGGAGATGAC GCTGAACTGC GGCGTCGGCA TGGTCGCGCT CGTCGATCCC
GCGGACGCCG ACGCGGCCGT CGCCGTCCTC GGCGAGCACG GCGTGCGCGC CTGGGTGGCC
GGGGAGGTCA TCGCCGACGC CGAGCGCGGC GGCCGGGTCG AGCTGGTCGG CCAGCACCCC
GGCTGGTGA
|
|---|
| Protein sequence | MSEPVPGNAY AAAGVSIEAG DKAVELMKVW VEKARRPEMI GGIGGFAGLF DASALKSYTR
PLLATSADGV GTKVAIAQAL DKHDSIGFDL VGMLVDDLVV CGAEPLFLTD YIATGRVLPE
RIAAIVKGIA EACIEAGCAL LGGETAEHPG LLGPDEYDVA GSTTGVVDAD DLLGPGRVRP
GDAVIAMESS GLHSNGYSLV RHVLLAPTDA GGAGWTLDRQ VDELGRTLGE ELLEPTRIYT
RACLALARGT RTHAMSHITG GGLAANLERV LPVELAATLD RRTWTPAPVF DLVRRVGAVP
QPDLEMTLNC GVGMVALVDP ADADAAVAVL GEHGVRAWVA GEVIADAERG GRVELVGQHP
GW
|
|---|
| |