Gene Noca_4300 details

Gene Information

• Locus tag: Noca_4300
• ID: 4596818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4542782
• End bp: 4543459
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639778910
• Product: transcriptional regulator
• Protein accession: YP_925484
• Protein GI: 119718519
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTCA GCGCCAGCGA CGAAGTCACC CTCGCGACCC GGAGCGTCCG GGCCGAGCGT 
CGGCGGCGGC AGCTCCTCGG GGCGGCCGCC CGGCTGATGG ATCGCAGCGG CTCGGAGTCG 
GTGTCGATGC AGGCCCTCGC CGACGAGGCC GGGGTCAGCG TGGGCCTGAT CTACCGCTAC 
TTCGGGGGCA AGGACGACCT GCTCCTGGCC GTCATCGTCG AGGTGCTGGA CACCTTCGCC 
GAGCGAGTGC CCGCCGCCAT CGAGGAGTCG GGCGACGACC CGGCCCGCCG GCTCGCCGCC 
GCCTTCCGCA CCTACTGCGA GGTGATCGAC GAGCAACGAC ACGCCGCGGT CCTCACCTAC 
CGGGAGAGCA GGTCACTGAC CGATGCCGGG CGCGAGCGGA TCAAGGAACT CGAGGTCAGC 
ACCAGCGAGC CGCTGCGGGA GATCTTGCAG GCCGGCATCG AGCGCGGCAC CTTCATCGCC 
GAGGTGGACG CCGACCTGGT GGCCTACAAC CTGCTGCTGG AGGCCCATGC CTGGGCGCTC 
AAGCACTGGT ACTTCGAGCG CACGCTGACC CTCGACGACT ATGTCCGCCG ACAGGTGTCG 
CTCGTGCTGC GGTCCCTGCT CGAGACACGG CACCGGCGCA GGTACTCGGA CCTGCTCAGC 
ATCGCCTCCG TCGACTGA 

 

Protein sequence

MSVSASDEVT LATRSVRAER RRRQLLGAAA RLMDRSGSES VSMQALADEA GVSVGLIYRY 
FGGKDDLLLA VIVEVLDTFA ERVPAAIEES GDDPARRLAA AFRTYCEVID EQRHAAVLTY 
RESRSLTDAG RERIKELEVS TSEPLREILQ AGIERGTFIA EVDADLVAYN LLLEAHAWAL 
KHWYFERTLT LDDYVRRQVS LVLRSLLETR HRRRYSDLLS IASVD