| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4276 |
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| Symbol | |
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| ID | 4596791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4518204 |
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| End bp | 4519862 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639778883 |
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| Product | CdaR family transcriptional regulator |
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| Protein accession | YP_925460 |
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| Protein GI | 119718495 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.416478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGGACC CCCACGGCGA AGTGACCCTC GAGCGGCTCC TCGACGAGCG GCTGCTCCAG
GGCGCGGTGC TCGTCGCCGG CGCAGACCCC GGCGTGGCGG TGCGGTGGTG CCACTCGCTG
GCCGACCTCG AGGACCCGCC GCGCGACCTG GACCTGGTCG CGGTGATGGC CCGCCCCGAG
CAGCTGACCG CGACCGTGCT GCAGCGGCTG GTGGCTGCCG GCGCGGCCGC GGTCTTCGTG
CTCGCCTCCT CCGAGGCCGA CCGGTCGCCG CCTGCGGTGC CGGGGTTGAA CGTCGTCGTC
GTGCCGCCGG GCGTGCCGCC CCGGGCGCTG GCCGAGCTGG TCGCCCGCCT CGGGCTGGCC
CACGAGAGCC ACGTGCTGCA GTACGCCCAG CGGGTGCACA GCGCGCTGGC GCAGCTGCTC
CATCGCGGCG CCGGCGTCTC GGCGCTGTGC ACCCGGATGT CGCGGCTGAG CAACTGCTCG
GTGGCCGTGA TCGCGACCGA CCTGAGGATC CTGGCCTTCG ACCAGGGGCC GAACCCGTGG
ATGCACGCCT CGATGGTCGC GGCGACCGTC CGGGAGCTGC ACGAGCGGCT GCTCCAGGAG
GACGTCTCGG CGGGGCCGGT GACCCTGGAG ACGTCGATCG GCGACAACGA GGTCGTGTGC
GTGGTCGGCG CCATCGAGCT GGCCGACCAC CGGGAGGGGT GGATCGCCGT CATCAACGCC
GACGACTCGC CGCACGGGCA CGACCTCGCC GAGCACCGCG TGGTGGTGGA GCAGGCCGCC
ACCATCGTCG GCACCGAGCT GCTGCGGCTG CGCAGTGTGG AGCGCGCGGA GGAGCGGGCC
CGCGGCAACT TCGTGCACGC GCTGCTGCAC GGCCGGTTCT CCAACCACGC CGACCTGGTC
GCCCGGGCGT CGCACCACGA CTTCGCCGTC GAGGGCCGCT ACGGCGTCGT GATCGCGCGC
AGCGCCGGCC TGATCGCGGA ACGCGACGCG CCGGTCCGGC TCGCCGAGAT GGCGCGCGAG
GCGCTCCGCG TCGCACCCGT GGACGACCGG CAGACGCTGA CCGCCGTGGT CGGGGACGTG
CTCGCGGTCG TCCGGCAGGT CTCACCGGCG GGCCGCACGC ATCCGGACCC GACCGCCCAC
GAGCTGCGGG ACTACGCGAC CGGCCTCGAG CGGCGCCTGG CCCGGCTCCT GCAGCGCCCG
GTCCACGTGG CCTACGGCCG TCCGGTGAAG GGCGCCGAGC AGATCGTGCT CAGCTACCGC
GAGGCCCGGA TCGCCCTGGA CCTCGGCGAG CGGCTCCGGA TGGAGCGGGT CTGCGGCTTC
GCCGACCTCC GGGTCGACTC GGCGCTGCTC GGGCTCGCGC GCGAGCCGGC CGGCAAGAGC
TTCTTCACCG ACGTCCTCGA GCCGCTCCGC CAGGATCGGA GCGGGACGCT GCTCGACGTC
GCCCGGGAGT ACGTCGCGGC GGGGGGCAAC GTGAACGAGT CGGCGCGGCG ACTCGGGATC
CACCGCAACA CGATGCTGTA CAAGCTGGAC CGGATCTCGC GGCTGCTCGA GCGGGACATC
CGCGAGGCGG ACACCCAGTT CACGATCTGG CTCGCCCTGC GGCTCTCGAC GCTGGCCGCG
ACCGCCGAGC TCGTCGACCG GGACGTGAGC TCGGGCTGA
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| Protein sequence | MSDPHGEVTL ERLLDERLLQ GAVLVAGADP GVAVRWCHSL ADLEDPPRDL DLVAVMARPE
QLTATVLQRL VAAGAAAVFV LASSEADRSP PAVPGLNVVV VPPGVPPRAL AELVARLGLA
HESHVLQYAQ RVHSALAQLL HRGAGVSALC TRMSRLSNCS VAVIATDLRI LAFDQGPNPW
MHASMVAATV RELHERLLQE DVSAGPVTLE TSIGDNEVVC VVGAIELADH REGWIAVINA
DDSPHGHDLA EHRVVVEQAA TIVGTELLRL RSVERAEERA RGNFVHALLH GRFSNHADLV
ARASHHDFAV EGRYGVVIAR SAGLIAERDA PVRLAEMARE ALRVAPVDDR QTLTAVVGDV
LAVVRQVSPA GRTHPDPTAH ELRDYATGLE RRLARLLQRP VHVAYGRPVK GAEQIVLSYR
EARIALDLGE RLRMERVCGF ADLRVDSALL GLAREPAGKS FFTDVLEPLR QDRSGTLLDV
AREYVAAGGN VNESARRLGI HRNTMLYKLD RISRLLERDI READTQFTIW LALRLSTLAA
TAELVDRDVS SG
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