Gene Noca_4228 details

Gene Information

• Locus tag: Noca_4228
• ID: 4596742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4469118
• End bp: 4471079
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 639778834
• Product: hypothetical protein
• Protein accession: YP_925412
• Protein GI: 119718447

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCCGC CAGCGGTCCG GGACGCTCGT TCATGCACTC TGTGGGGAGG TCAGTCCATG 
GCCGTGGGCC GCCGCGCGCT CGCCGTCATC GTCGCCATCG CCGTCGCGCT GGTCACCGGG 
TCCACCATCG CCCTGGCCAG CACCGGGCAG GCCGCGGGCG AGCCCGCGCC GGCCCGGCTG 
CATCCGGTGC TGGTCAGCGG GTCCGGGGTC GGCGCCCTGA CCTGGCACGG GCCGGGGGCC 
ATGCTCGGGG AGTACGCCGC GAGCATCACC GCCGGCGCGA TCGGCATCGC GGACCAGCCG 
CGGCTCGCCA CGAGCGGCCA GGCCGACACG GTGCGCATCG GGAAGTACGC CACCAGCGGG 
CCCGCGGCGA TCAGCCTGGC GCTGATCCGC GGCAACGCCG TCCAGCTGAT CGGTGGCGTC 
GACCTGCCGG CGGCGGCCGG GGTGTACCAG TACGGCTTCG TCGACGGCGC CGGCGCGCCG 
ACGACGCTGC CGTTCCAGGC CGGCGACCGG CTGGGCATCG TCAACGAGTC GAGCGCTCCG 
CTCCCCGTGA TCGCCAAGGC GAGCACGGCG TACAGCGAGG AGGAGTGCAA CCTCGACGCC 
GCGAACGCGC TGACCGGCTG CACCATCGCG ACCGTCGGGT GGCGGCTGCA GGTTGACCTG 
GGCGTCGGCG AGGCGGCGCC GAGCGGCCCG AGCACGTCCG CCTCCCCCAC GGGCCCGGCG 
AGCCCGACCG GCTCCGCGAC GCCGACCGGC TCCGCGTCAC CCACCGGCTC GGCGTCGCCC 
ACCGGCTCCG CGTCCCCGAC GGGCTCGGCG TCCCCGACCA CCCCGACCGG TTCCGCGACC 
CCGAGCGACC CGAGCGACCC GGGCGGCGTC GACCCCGGGA CCCCGGGGGC GCCGGTGACC 
AACTGCCCGA CCGGGATCGC GGCCGACGGC TGGCGGATCC CGAAGAGCAC TCGGGCGCCG 
CGCTCGCTGG TCGGGTTCGA CCTGGCCAAG GACGGCCGCG ACAAGCTGCG GGGCACGCTG 
GTCACCTCGC TCACCGACAA CCTGGTCGAG CGGCTGCCGA GCGGCCGCGG GGCGTACTAC 
AGCAGCTCGA CCCGCGCGTC GGCGTACTCC CTGGCCGGCG CGACCCAGGC CGTCGCCTGG 
TCCGAGCATC ACGACGTCAC GCTCGACAGC GGGCTGCTGC TGCCGTGCGA GGCCGTCTAC 
GCGACGCTGC GGGCGGGCGG GCCCGCACAG CCGCTGCTGT GGGCGAAGTC CGGCGGCCTC 
GACCGCCTCG ACGCCGCCGT CGACGAGGCC GGGCGGCTGG CGCTGGTCGT CACCAACGCG 
GCGCCGCTGG ACAAGGACGT GCGTGCGCTG TACTGGCCGG CGGTGCGCAA GGACGGGGTG 
TACGACGTGC GGGCCGGCAC CCGGCTGCCG CTGCGCGGCG TCGAGACGGT GCGGGTCGCG 
ACCGCCGGTG GGCGGGTCGT GATCGCGGTG GCCGGGTTCG GCCGGATGGC GGTGTACACC 
GGGCCGATCA CCGGCCAGCT CCGGGAGGTG TTCCGGGCCC GCAAGGTCGA CCCGTCGCTC 
GACGTGGCGG TGGGGCGCGG CGGCACGCCC GTGGTGGCCT ACGCCAGCGA CGGCCGGCTG 
CACCTGCTGG TCGGCGGGCG CGACGTGGAC ACCCGCTACC CGGCGTACGG CGCGGCCATG 
GCGCTGTCGA AGTCCGGCAC CGTCGCGCAC CTCGCCTGGT CGGTCAAGCC GACCGCGGAG 
CCGTGCCCGA CCAGGTCCGG GCTGCTGTAC AACTGCGCCG GCCGCAACGC GCTGCTGGTC 
GCCGACGCCG CACTCTCGAA CGGGCGGCTG CGGCACGTCG GCATCGGCGC CTGGCTCGGC 
GACGGCGTCG CCCCGCAGGT CGTGGTCGGG CCGGGCGACC GCGCGGCGGC GTACTACATC 
CCGCCGACCA GTCGTCGGCT CGTGGTGCGG CCGGTGCCGT GA 

 

Protein sequence

MMPPAVRDAR SCTLWGGQSM AVGRRALAVI VAIAVALVTG STIALASTGQ AAGEPAPARL 
HPVLVSGSGV GALTWHGPGA MLGEYAASIT AGAIGIADQP RLATSGQADT VRIGKYATSG 
PAAISLALIR GNAVQLIGGV DLPAAAGVYQ YGFVDGAGAP TTLPFQAGDR LGIVNESSAP 
LPVIAKASTA YSEEECNLDA ANALTGCTIA TVGWRLQVDL GVGEAAPSGP STSASPTGPA 
SPTGSATPTG SASPTGSASP TGSASPTGSA SPTTPTGSAT PSDPSDPGGV DPGTPGAPVT 
NCPTGIAADG WRIPKSTRAP RSLVGFDLAK DGRDKLRGTL VTSLTDNLVE RLPSGRGAYY 
SSSTRASAYS LAGATQAVAW SEHHDVTLDS GLLLPCEAVY ATLRAGGPAQ PLLWAKSGGL 
DRLDAAVDEA GRLALVVTNA APLDKDVRAL YWPAVRKDGV YDVRAGTRLP LRGVETVRVA 
TAGGRVVIAV AGFGRMAVYT GPITGQLREV FRARKVDPSL DVAVGRGGTP VVAYASDGRL 
HLLVGGRDVD TRYPAYGAAM ALSKSGTVAH LAWSVKPTAE PCPTRSGLLY NCAGRNALLV 
ADAALSNGRL RHVGIGAWLG DGVAPQVVVG PGDRAAAYYI PPTSRRLVVR PVP