| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4226 |
|---|
| Symbol | |
|---|
| ID | 4596740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4467029 |
|---|
| End bp | 4467940 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639778832 |
|---|
| Product | 3-keto-5-aminohexanoate cleavage enzyme |
|---|
| Protein accession | YP_925410 |
|---|
| Protein GI | 119718445 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGAGAC CCCCGCACGG ACGCAGGGCC CCAGCCACTG ACACAACGCC CCTCTGGCAC
GATGCGATCG TGCCGACGAC GTCACCCGAG AAGATCCTGA TCACCGTCGC CCCCACCGGG
GCGGAGACCA CCAAGCAGGA CTGCCCCCAG CTCCCGACCA CCCTCGAGGA GCTCGTGCAG
ACCGCCCAGG AGTGCGAGGC CGCGGGCGCG GCGATGATCC ACGTCCACAT CCGCGACGCC
GACCACCGCC CGACGCTGGA CCAGACCCGG CTCCGCGACA CCGTCCAGGC GCTGAGGGAG
AGCACCGGCC TGATCGTCCA GCTCTCCACC GGCGGCTCCG TGCACGACCC GCTCGAGAAC
CGCCTGAAGG TTCTCGACGC CGAGCCGGAC TCCTGCAGCC TGACCATGGG TACGACGAAC
TTCGGCGACG ACGTGTTCTC CAACCCGTGG CCGTTCGTGT GCGAGCTCTA CCAGCTCAGC
CAGGAGCGCC AGGTGGTGCC GGAGTTCGAG CTCTTCGACC TGGGCCACGT GCACGCCCTG
CGCCGCCTGA TCGACAAGTT CGGCCTCCCG TACGGCGGCC AGGTGCACTG TGACTTCGTC
ATGGGCGTCC CCGGCGGCAT GCCCGGCACC GCCCCGGCCC TGGTCGCCGG CGTCGCGCTG
CTCCCCGACG AGGTGACCAG CTGGTCGGCC ACCGGCATCG GCCGCAGCAC CCTGCCGGTG
ATGCTCGCCG CCCTCTCGAT GGGCGGGCAC CTCCGGGTCG GCATGGAGGA CGTGCTGACC
CTGGCGAAGG GCGTCCCGGT CGAGCGCAAC GCCCAGCTCG TCGAGCGGGC GGTCACGGCG
GCCCGTCTGG CGCAGCGCAC CCCGATGCAG CCGTCGGAAG CGAGAACGGC CATCGGCCTC
CCGGCTCGCT GA
|
|---|
| Protein sequence | MSRPPHGRRA PATDTTPLWH DAIVPTTSPE KILITVAPTG AETTKQDCPQ LPTTLEELVQ
TAQECEAAGA AMIHVHIRDA DHRPTLDQTR LRDTVQALRE STGLIVQLST GGSVHDPLEN
RLKVLDAEPD SCSLTMGTTN FGDDVFSNPW PFVCELYQLS QERQVVPEFE LFDLGHVHAL
RRLIDKFGLP YGGQVHCDFV MGVPGGMPGT APALVAGVAL LPDEVTSWSA TGIGRSTLPV
MLAALSMGGH LRVGMEDVLT LAKGVPVERN AQLVERAVTA ARLAQRTPMQ PSEARTAIGL
PAR
|
|---|
| |