| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4220 |
|---|
| Symbol | |
|---|
| ID | 4596734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4460939 |
|---|
| End bp | 4462048 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639778826 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_925404 |
|---|
| Protein GI | 119718439 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATGGC GGGTCAAGTT TATCGACTTT CCGCTGCAAT GGGAGCAGCA GCGAGCGCAC
CTCCTTCCGG TCATCGACGA CACACTGGCG CGGGGCGACG TCATGCTTCG CCACCAGCTC
GTGGACTTCG AGGAGCATCT CGCTGAATTC GTGGGGACTC GCCATGGCGT CGGCGTGAGC
AACTGCACCG ACGGACTACG GCTCATAGCC CATTCCCTCG GCATTGGTCC CGGGGATGAG
GTCGTCACGG TCGCGCACAC ATTTATCGCG ACAATCTCGC CCTTCGTAAT GCGGGGAGCG
TCGCCAGTGT TTGTCGACAT TGGTGACGAC CAGTTGATGG ACACGAGTCA ACTCGAGGCT
GCAGTGACCG AGCGGACGAG GGTCATCGTC CCAGTTCATC TCAATGGTCG CACCGTCGAT
ATGACCGAGG TGCTCAGGAT TGCCGAGGCC TGCGGTGCGA CGGTGATTGA AGATGCGGCT
CAGGCGCTCG GAGCCACTAT CGATGGCCGC ACCGCCGGGT CCATGGGCTT GGCCAGCACC
TACTCGTTCT ACCCAGCCAA AATGCTCGGA ACACCGGGCG ACGGTGGTGC CGTGCTAACC
GACGACGACG AGCTCACGGC CGACATACGC CGACTACGTG ACCACGGGCG CGTATCCAAG
ACGGAGGTCG ACGGCTGGGG CTACAACTGC CGGCTTGACA ACTTGCACGC AGCAATTCTC
GACTGGCGGC TGACCCAGAT TCCCCGCTGG ATCGAGCACC GCCGGACCGT CGCCGACATT
TACGACCAGA TGCTTGCGGA CATCGAGGGG CTCGACTTGC CGGTCGGCCC CGACGCGGAT
CCGCGGCGCA GGGACGTCTA TCAGAACTAC ACGGTCATGA CCGATCGCCG CGACGACTTG
GTCAAGCATC TCAACAGCGA CGGCGTCGAG GTGCTCGTGT CGTGGCCGGT CCCGTTCCAC
AAGCAATCGG GAGTCGGGCT TGACCACTGG AATCTGCCCA ACACCGAGCG ACTTAGCCGC
CGGGTCCTGT CGTTGCCGAT GAACGCTGAA CTCGACTTAT CGCAGGTCGA ATACGTCGCT
GAATCGGTTC GACGGTTTTT CGGTCGATGA
|
|---|
| Protein sequence | MGWRVKFIDF PLQWEQQRAH LLPVIDDTLA RGDVMLRHQL VDFEEHLAEF VGTRHGVGVS
NCTDGLRLIA HSLGIGPGDE VVTVAHTFIA TISPFVMRGA SPVFVDIGDD QLMDTSQLEA
AVTERTRVIV PVHLNGRTVD MTEVLRIAEA CGATVIEDAA QALGATIDGR TAGSMGLAST
YSFYPAKMLG TPGDGGAVLT DDDELTADIR RLRDHGRVSK TEVDGWGYNC RLDNLHAAIL
DWRLTQIPRW IEHRRTVADI YDQMLADIEG LDLPVGPDAD PRRRDVYQNY TVMTDRRDDL
VKHLNSDGVE VLVSWPVPFH KQSGVGLDHW NLPNTERLSR RVLSLPMNAE LDLSQVEYVA
ESVRRFFGR
|
|---|
| |