| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4210 |
|---|
| Symbol | |
|---|
| ID | 4596724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4450213 |
|---|
| End bp | 4451301 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639778816 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_925394 |
|---|
| Protein GI | 119718429 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGT TCATCCCACC GGCCAGGCCG ATCATCGGCG ACGAGGAGCG CGCCGCAGTC
GACCGCGTGC TCCAAAGCGG CATGCTGGCG CAGGGACCCG AGGTCGCCGC CTTCGAGACC
GAGTTCGCCG ACCACTTCCG GCTCGGCCGC GTCTGCGTCG CCGTCAACTC CGGCACCTCG
GGGCTTCACC TCGGACTACT CGCCGCTGGC ACCGGCCCCG GCGACGAGGT GATCGTCCCG
TCGTTCACCT TCGCCGCCAC TGCCAACGCC GTCGCGCTCA CCGGCGCGAT CCCAGTCTTC
GCCGACATCG ACCCAGCGAC CTTCTGCATG GACCCCGCCA GCGTCGAGGC AGCGATCACC
GACCGGACGG CAGCGATCAT GCCGGTGCAC CTGTACGGTC ATCCGGCGGA CATGACGGCA
CTGCAGGCGA TCGCCGACAA GCATGGCCTC CAGATCTTCG AGGACGCCGC CCAGGCGCAC
GGCGCCAGTC TCCACGGGGT TCCCGTCGGA GCGTTCGGCA CGTTCGCGAT GTTCTCGCTC
TACCCAACCA AGAATATGAC CTCCGGCGAG GGTGGCATGG TCTCGGTTGC GAACGACGAG
GTCGAGCGAC TCGTACGCCT GTATCGCAAC CAGGGGATGC AGCGTCAGTA CGAGAACGAG
GTCGTCGGCT TCAATAACCG GATGACCGAC ATCCACGCGG CCATCGGTCG AACCCAGCTG
ACCAAGGTCG ACGGCTGGAC CAGCCGGCGC CAGGAGAACG CCGCGTTCCT CACCTCCAAC
CTCGAAGGCG TGATCGCCCC ACCGGTGGCC GAGGGTGCCG TGCACGTCTA CCACCAGTAC
ACGGTCCGGG TGCCGCAGGA CCGCGACGGC CTCGCCGCCG CTCTCCGCGA GGAGTACGCC
GTCGGGTCCG GGATGTTCTA CCCGATCCCC AATCACCGCT TGGCGCCATT CCGCTCGCCT
GTCGACCTGC CGGCGACCGA TCAGGCCACA CTCGAGTGCC TGTCGCTGCC GGTCCACCCT
TCCCTGTCCG CGGACGACCT CGAGAGGATC GTGGTCGCGG TCAACAAGCT CACAGCGGCG
GGAGCCTGA
|
|---|
| Protein sequence | MDAFIPPARP IIGDEERAAV DRVLQSGMLA QGPEVAAFET EFADHFRLGR VCVAVNSGTS
GLHLGLLAAG TGPGDEVIVP SFTFAATANA VALTGAIPVF ADIDPATFCM DPASVEAAIT
DRTAAIMPVH LYGHPADMTA LQAIADKHGL QIFEDAAQAH GASLHGVPVG AFGTFAMFSL
YPTKNMTSGE GGMVSVANDE VERLVRLYRN QGMQRQYENE VVGFNNRMTD IHAAIGRTQL
TKVDGWTSRR QENAAFLTSN LEGVIAPPVA EGAVHVYHQY TVRVPQDRDG LAAALREEYA
VGSGMFYPIP NHRLAPFRSP VDLPATDQAT LECLSLPVHP SLSADDLERI VVAVNKLTAA
GA
|
|---|
| |