| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4198 |
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| Symbol | |
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| ID | 4596712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4436819 |
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| End bp | 4437610 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639778804 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_925382 |
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| Protein GI | 119718417 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG ATCTCGACCT CCTGGCGGCC TCGCCCGAGC ACTTCAGCCT GACCGACAAG
CACGTGGTCG TCACCGGCGG CGGTCGGGGG CTGGGCCAGG GAATCGCCGT CTCGGCAGCG
CTCTCCGGCG CGGCGGTCAC CGTCGTCGCC CGCTCCAAGG ACCAGCTGCA CGCTACCGCC
GACCTGATCG CGCGCACGGG CGGCACCTGC CGCGTCGTCA CCGCCGACCT CTCCGACACC
GAATCGCTCG ACCGTCTCGT CGATGACCTC TCCGAGTCGG CGCCGATCGA CGGGATCGTC
CACGTCGCCG GCGTTCAGCT TCGCAAGGCG GCCGTCGACG TGACGGTCGA CGATTGGCGG
TGGGTGCAGC GGATGAACGT GGAAGCCCCC TTCTTCCTCA GCACGGCCGT GGCCAGGCGG
CAGCAGGGGG AAGGTCGCCC GGGCTCTCAC GTCTTCATCG GCTCGCTCAA CAGCACGATC
GGGCTCCCGC GGATCTCCCC CTACGCGGCA TCCAAGACCG CGTTGCTGGG CATGGCTCGG
GTGCTGTCGA CCGAGTGGGC AGCCCATGGC CAACGCGCCA ACGTGGTCGG ACCGGGGTAC
TTCCACACAC AGCTCACCGA CGATCTGTTC ACGGACCCGG CCAACCGCGC ACGGATCCTC
GGGCGCATCC CGGCGGGTCG CCTTGGCACG CCCGCCGACC TCGGTGGCGC CGTGGTGTTC
CTGCTCAGTG ATGCCTCGCG ATACCTCACC GGCCAGCTCA TCAACGTAGA CGGTGGCTGG
CTCGCCTCTT GA
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| Protein sequence | MSDDLDLLAA SPEHFSLTDK HVVVTGGGRG LGQGIAVSAA LSGAAVTVVA RSKDQLHATA
DLIARTGGTC RVVTADLSDT ESLDRLVDDL SESAPIDGIV HVAGVQLRKA AVDVTVDDWR
WVQRMNVEAP FFLSTAVARR QQGEGRPGSH VFIGSLNSTI GLPRISPYAA SKTALLGMAR
VLSTEWAAHG QRANVVGPGY FHTQLTDDLF TDPANRARIL GRIPAGRLGT PADLGGAVVF
LLSDASRYLT GQLINVDGGW LAS
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