| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4184 |
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| Symbol | |
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| ID | 4596698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4422049 |
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| End bp | 4423881 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639778790 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_925368 |
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| Protein GI | 119718403 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACT TGGTCGCGCG TATGAGGCGG CGCCGCGCGC CGCTCGCCAT CGCGTTCGAC
GTGTGTGCCT GGTTGCTCGG CTACGCGGCG TTCGCCTGGC TTCGGCTCGA CAGTGACGCC
TCGAGCGTGC CGTGGCCGGA GGTGCTCGCC TTCGCGACCG TGACTGCGAC GCTGTACGTG
GCACTGGCGG CGCCCCTCCG GCTCCACCAG GGCCGCGCCC GCACCGCGAG CCTGGAGGAG
ATGGTGCTCC TCGGGATGCT GATGGGCGGC GTCGGTGGCG GCGTCTTCCT GGTGAACCTG
TTCGGCCAGT GGATCCCCCG CAGCATCCCG GCCGGGGCGA CCTGCGGTGC GCTCGTGCTC
GCCGCGTGGG CGCGGGCGAG CTGGCGGACC CTGCAGGAGC GCGACGAGCG CACCGGCGCC
GGTGAGGACA CCGAGCGGAC GCTGGTGATG GGCGCGGGTG AGGCCGGCCG CGAGCTGATC
ACCTCGATGC AGCGCGACCC GCTGCGGCGC TACCTGCCGG TCGGACTGCT CGACGACGAT
CCCTACAAGC GGCACCGCCG GCTGCGCGGC GTACCCGTCC TCGGGACCAG CTGCGACCTG
GAGAAGGAGG TCGCGCGCAC CGGGGCGACC ATGGTCGTGA TCGCGATCCC CAGCGCCAGT
GCCGAGACGG TCAACCGGCT CCGGCTCACG GCTCTGGACG CCCATGTGTC GGTCAAGGTG
TTGCCGTCCA CCACGCAGCT CCTCACCGAC AGCGTCGGCA TCCGCGACCT GCGGGACATC
AACATCACCG ACGTACTCGG CCGCAACCAG CTGGACACGG ACGTCGCCTC GATCGCCGGC
TACCTGGCCG GGCGGAAGGT GCTGGTCACC GGTGCCGGCG GCTCCATCGG CTCCGAGCTG
TGCCGCCAGA TCTACCGCTA CCAGCCGGCC GAGCTGATGA TGCTCGACCG TGACGAGTCC
GCGCTCCACT CGGTCCAGCT CTCGATCCAC GGCCGTGCCC TGCTGGACTC GGACGACGTC
ATCCTGTGCG ACATCCGGGA CGAGAAGGCG GTGCGAACCA TCTTCGCGAA CCGTCGCCCC
GACGTCGTCT TCCACGCCGC CGCGCTCAAG CACCTGCCGA TGCTCGAGCA GTACCCGGCC
GAGGCCGTGA AGACCAACGT GATCGGCACC CGCACGGTTC TCGATGCCGC AGACCTCGTC
GGTGTCGACA GGTTCGTGAA CATCTCCACG GACAAGGCGG CGAACCCGTC CAGCGTCCTG
GGCTACTCCA AGCGGGTCGC CGAGCGGATC ACAGCCGCCC AGGCGCGCGA GGCTTCCGGG
ACGTATCTCT CGGTGCGCTT CGGGAACGTG CTCGGCAGCC GTGGCTCGGT GCTGGCGGCG
TTCGCCCGGC AGATCGCCGC CGGTGGGCCG ATCACGGTCA CCCACCCGGA CGTCAGCCGC
TTCTTCATGA CGATCGAGGA GGCCTGCCAG CTGGTCATCC AGGCGGCTGC GATCGGCGGG
CCGGGGGAGG CGCTCGTCCT CGACATGGGC GAGCCGGTGA AGATCGTGGA CGTCGCCGAG
CAGCTGATCG AGCAGGCCGG CACGCCGGTG CCGATCGAAT ACACCGGGCT GCGCGAGGGC
GAGAAGTTGC ACGAGGAGCT CTTCGGCGAA GGCGAGCCGT GCGACGTCCG GCCGCGGCAC
CCGCTGGTCT CGCACGTGCC GGTGCCACCG ATCACCGACG GCGAGGTCCT GGGCCTCACC
CTCGTCGGCG AGCCTGACGA CGTGCGGCAG GCGCTGCACG ACGCGTGCCT GGTGTCGATC
GAGGCCGACG ACCCGTCCTC GCTGCGGAAC TGA
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| Protein sequence | MSDLVARMRR RRAPLAIAFD VCAWLLGYAA FAWLRLDSDA SSVPWPEVLA FATVTATLYV
ALAAPLRLHQ GRARTASLEE MVLLGMLMGG VGGGVFLVNL FGQWIPRSIP AGATCGALVL
AAWARASWRT LQERDERTGA GEDTERTLVM GAGEAGRELI TSMQRDPLRR YLPVGLLDDD
PYKRHRRLRG VPVLGTSCDL EKEVARTGAT MVVIAIPSAS AETVNRLRLT ALDAHVSVKV
LPSTTQLLTD SVGIRDLRDI NITDVLGRNQ LDTDVASIAG YLAGRKVLVT GAGGSIGSEL
CRQIYRYQPA ELMMLDRDES ALHSVQLSIH GRALLDSDDV ILCDIRDEKA VRTIFANRRP
DVVFHAAALK HLPMLEQYPA EAVKTNVIGT RTVLDAADLV GVDRFVNIST DKAANPSSVL
GYSKRVAERI TAAQAREASG TYLSVRFGNV LGSRGSVLAA FARQIAAGGP ITVTHPDVSR
FFMTIEEACQ LVIQAAAIGG PGEALVLDMG EPVKIVDVAE QLIEQAGTPV PIEYTGLREG
EKLHEELFGE GEPCDVRPRH PLVSHVPVPP ITDGEVLGLT LVGEPDDVRQ ALHDACLVSI
EADDPSSLRN
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