Gene Noca_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4180 
Symbol 
ID4596694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4417111 
End bp4418364 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID639778786 
Producthypothetical protein 
Protein accessionYP_925364 
Protein GI119718399 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGAGT ACCGCAACCG CGTGGCTGAT GACGAGCTCG CGAGCAGGAT GCGAGCCGCC 
GGTGCCGTGC TCATCGAGGG GCCGAAGGCG TGCGGCAAGA CCGCGACCGC TCAGCGAGTT
GCGACGACGA CATTCCGTCT GGATGTCGAC GACGGGGCCC GCGACCTGGT CGACGCCGCC
CCCGAGTTGC TGCTGGGCGC CGACCCGCCG GTGCTCTTCG ACGAGTGGCA GCTGGCGCCG
AAGCTGTGGA ATCTCGTGCG GCGCGAGGTC GACGACCGAG GCATACGCGG GCAGTTCATC
CTGACCGGGT CCGCGACCCC GAACGACGAC ACCAGCCGAC ACCCTGGCGC AGGTCGATTC
TCCAGGCTGC GGATGCGTCC GATGAGCCTG TTCGAGTCCG GGGTGTCCAC CGGAGAGGTC
TCCCTCGGGG CACTTTTCAA CGGGGACTTC AAGCCCAGCC TCGACCCCGG CGTCACCGTC
CCGAAGCTCG TCGATCACCT GATCGTCGGT GGCTGGCCCG GTCTGCTCGA GGCCTCCGTC
CGTGACGCCC AGCGCTGGCT CGCCGACTAT CTGGCCACCA TCGTCGAGGT CGACCTCCCT
CAGCTGGGGG TCCGTCGCGA CCCGGCAACG CTACGCAGGC TCCTCGCATC CCTCGGTCGA
GGCGTCGGTA CCGAGCTCAG CACGAAGGCC ATCGCCGACG ACGTCGGCGG AGCCGACGGA
CCCGCGCGCC GAGACACCGT CGCCGGCTAC CTCCGCGCAC TCGAGCGCCT CATGCTCATC
GAGGACGTGC CCGCATGGGG GCCACACATG CGGTCCACCA CCCCGCTCCG CAAGTCCGCC
ACCCGCTTCA TGACGGACCC GTCCCTTGGG CTCGCCGCCC TCGGCGTCGG GCCCGAACAC
CTCCTGCGGG ACCTCAACGC CACGGGCTTC CATTTCGAGG GGCTGGTCGC GCGGGACCTC
CGCGTGTACG CCCAACCTCT CGATGGACAG CTGTGGCACT GGCGCGACAA CAACGGCCAT
GAGGTCGACA TCGTCATCAC CCTCGCCGAC GGCCGCTGGG GAGCGATTGA GGTCAAGCTG
AACCCCGACT CCGTCGACCG AGCCGCCAAG TCGCTGGCCC GCTTCGCGAC GAAGGTCGAC
ACCAGCAAGG CGGGCGATCC CGCCTTCCTC GCCGTCGTCA CCACCCGCAC TGCCGCGCTG
CGCCGACCCT CCGACGGCAT TTACGTCCTG CCGGTCGCCA CCCTCGGCCC GTAG
 
Protein sequence
MLEYRNRVAD DELASRMRAA GAVLIEGPKA CGKTATAQRV ATTTFRLDVD DGARDLVDAA 
PELLLGADPP VLFDEWQLAP KLWNLVRREV DDRGIRGQFI LTGSATPNDD TSRHPGAGRF
SRLRMRPMSL FESGVSTGEV SLGALFNGDF KPSLDPGVTV PKLVDHLIVG GWPGLLEASV
RDAQRWLADY LATIVEVDLP QLGVRRDPAT LRRLLASLGR GVGTELSTKA IADDVGGADG
PARRDTVAGY LRALERLMLI EDVPAWGPHM RSTTPLRKSA TRFMTDPSLG LAALGVGPEH
LLRDLNATGF HFEGLVARDL RVYAQPLDGQ LWHWRDNNGH EVDIVITLAD GRWGAIEVKL
NPDSVDRAAK SLARFATKVD TSKAGDPAFL AVVTTRTAAL RRPSDGIYVL PVATLGP