Gene Noca_4158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4158 
Symbol 
ID4596672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4392698 
End bp4393315 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content74% 
IMG OID639778764 
ProductTetR family transcriptional regulator 
Protein accessionYP_925342 
Protein GI119718377 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000188504 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACAC CACAGGGGGA GATCCGCCGG GGCCGTGGCC GGCCCCGGAC CCCCGGAGCC 
GAGAAGAGGA TCATCGACGC CGCGCTCGAG GAGTACGGCG AACACGGCTG GGCGGGCTTC 
ACGATGGACG GGGTCGCGCG TCGGGCCGGT GTCGGCAAGT CCACCGTCTA CCTGCGCTGG 
CAGGACAAGG ACAGCCTGCT CACCGACGCG GTGAGCAGCC GCAGCGGGGA CATCGGCGAC 
GTCGACACCG GCAGCCTGCG CGGCGACCTG CACGACCTGG CCGCGAACCT GTTCCGCCAC 
TACCGCGACC CGGCCGGCTG GGCCGCGCTG CGGGTGCTGG TCGACGCCGC GGGGGCGCCG 
CACCGGCTCG GCAGGTTCGT GGAGACGGTC GCCGACGTGC AGGTCGGGTT CGTCGACCAG 
ATCGCGGCCC GAGCGGTCGA GCGCGGCGAG GTGCCGGCCG ACCTGCCGGC CCGGGAGATC 
GGGCAGTGCG TCTACGGCTC GGTCACGATC CAGACCCTGA GCGCGCGCCT CGAGGGCCGG 
GAGTTCGACG ACGCCGAGAT CGAGGAGCGG GCCACGACCC TGGTCGACGT CGTGCTCCAG 
CAGGTCGTCG CCCCCTGA
 
Protein sequence
MSTPQGEIRR GRGRPRTPGA EKRIIDAALE EYGEHGWAGF TMDGVARRAG VGKSTVYLRW 
QDKDSLLTDA VSSRSGDIGD VDTGSLRGDL HDLAANLFRH YRDPAGWAAL RVLVDAAGAP 
HRLGRFVETV ADVQVGFVDQ IAARAVERGE VPADLPAREI GQCVYGSVTI QTLSARLEGR 
EFDDAEIEER ATTLVDVVLQ QVVAP