| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4146 |
|---|
| Symbol | |
|---|
| ID | 4596660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4379574 |
|---|
| End bp | 4380674 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639778752 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_925330 |
|---|
| Protein GI | 119718365 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGG TCCTGCGTGG GCGCGAGCCG CGGTGGCTCC CACCCGTCGC GGTCGCGGTC
GGCGTCCTGA TCACCGTTGC ACTGACCGCG ATCCCGATCC GGCTGTCCGA CGCGAATCCG
CCGGCCGCCT TCGAGCGGTA CCTCGTCACT CCGCTGACCT CGACCACCGG GCTGTACGAG
GTGCTGCTCA CCGCCACCCC GCTGTTGTTC ACGGGCGTCG CGGTCGCGCT CGCGTTCCGA
GCCGGGTACT GGAACATCGG TGCCGAAGGG CAGTTCCTCC TCGGCGCGAT CGGAACCACC
GCGATCGGCA CCGGCTTGCC CGACCTGCCC GCCGCGGTGG CGCTGCCGCT GGGCTTCGCC
GCCGGGGCCG CAGGGGGGCT CGTGTGGGCC GTGGTGCCCG CCTGGCTCAA GCGGCGGGCC
GGGATCGACG AGGTCGTCAC CACGCTGTTG CTCAACCCGG TCGCGCTGCT CCTGGTCCAG
GGGCTGCTCA ACGGGCCGTG GCGCAACTCC GAGAGCGGGT TCACCGACTC CGACCGGCTC
GGCCCGTCCT ACGACCTGCC CGCGCTGGTT CCCGGAAGCC GGCTGCACTG GGGCTTCGGG
GTCGCCGTAC TGGTCGTCGT GGCGGTGGGG ATCGTGCTGA CCCGCACCGC CACCGGGATC
CGGATCCGGG CAGCCGGCCA GGCTCCCCGG GCCGCGGAGT TCAGCGGGAT CGCGGTCGGT
CGCCTGCAGT TCCGGTGCGC GCTCGTGTCC GGCGGCATCG CCGGGATCGG CGGCGCGTCG
CAGGTGATGG GCGTCCAGCA CCAGTTGACC GGGGGCATCA GCAACAGCTA CGGCTACACG
GGTGTCATCG TCGCCACCCT CGGCGGCCTC GGTGCACTCG GGGTGTTCCT GGTCGCGTTC
CTGCTCGGCG ACCTGTCCGT GGGCGCGCAG AACGTGTCGC TGGTGCTGCA GGTGCCCGCC
CAGCTCGGCG CGATGTTCAG CGCGCTGTTG CTGCTGGCGG TGCTGTCGGC GATGACCTGG
CGCCGCTACC GGGTCCAGTG GCGTGGGTCG GCGACACCGC CCGCTCCGGC ACGCACTCCG
GAACGGGAGT CGGCCCGATG A
|
|---|
| Protein sequence | MRLVLRGREP RWLPPVAVAV GVLITVALTA IPIRLSDANP PAAFERYLVT PLTSTTGLYE
VLLTATPLLF TGVAVALAFR AGYWNIGAEG QFLLGAIGTT AIGTGLPDLP AAVALPLGFA
AGAAGGLVWA VVPAWLKRRA GIDEVVTTLL LNPVALLLVQ GLLNGPWRNS ESGFTDSDRL
GPSYDLPALV PGSRLHWGFG VAVLVVVAVG IVLTRTATGI RIRAAGQAPR AAEFSGIAVG
RLQFRCALVS GGIAGIGGAS QVMGVQHQLT GGISNSYGYT GVIVATLGGL GALGVFLVAF
LLGDLSVGAQ NVSLVLQVPA QLGAMFSALL LLAVLSAMTW RRYRVQWRGS ATPPAPARTP
ERESAR
|
|---|
| |