| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4133 |
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| Symbol | |
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| ID | 4596647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4364838 |
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| End bp | 4365650 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639778739 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_925317 |
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| Protein GI | 119718352 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.374056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTCAA CCTCGAGCCC AGCTTCGAGC CCGACCACTG GCTCCCCGGC CCAGCCCCTG
CTCGGCAAGG TCGCCCTCGT GACCGGCGGC AGCCGTGGCC TCGGCCGCGC CATGGTGCGC
GGTTTCGCCC GCGCCGGCGC CGACGTCGTC ATCTCCAGCC GCAAGCTCGA CGACTGCCGT
GCGCTGGCCG AGGAGGTCGA GCGCGAGCAC GGCCGCCGGG CGTTCCCGCA CGCTGCGCAC
GTCGGCCACT GGGACGAGGT GGGCGCGCTC GTCGAGGCGG CGTACGCCGA GTTCGGCCGG
GTCGACGTCC TGGTCAACAA CGCGGGCCTG GCGCCGACGT ACCCCGGCCT GGACCAGGTC
ACCGAGGAGC TCTTCGACAA GGTGATCGGG GTCAACCTCA AGGGCCCGTT CCGGCTCACC
GCCCTGGTGG CGACCCGGAT GGCCGCCGGC GCCGGCGGCT CGATCATCAA CATCAGCAGC
AGCGCCGCGG TGCGCCCGAT GACCACCGAC CTCCCCTACG CCGCCGCCAA GGGCGGCCTC
AACGTGCTCA CCGCCGGCTT CGCGCAGGCG TTCGGCCCCT CGGTCCGGGT GAACACGATC
ATGGCCGGCC CGTTCCTGAC CGACATGTCG CGAGGCTGGG ACATGGACGC CCTGACCGGC
GACCTCGCGC ACTACCCGAT GCGACGTGCG GGGGACCCCG ACGAGGTCGT CGGGGCCGCC
GTCTACTTCG CGAGCGACGC CTCGTCGTAC ACGACGGGCG CGGTGCTGCC CGTCGACGGC
GGCCGCGGTG TCGTCAGCTT CGGCTCAGCC TGA
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| Protein sequence | MTSTSSPASS PTTGSPAQPL LGKVALVTGG SRGLGRAMVR GFARAGADVV ISSRKLDDCR
ALAEEVEREH GRRAFPHAAH VGHWDEVGAL VEAAYAEFGR VDVLVNNAGL APTYPGLDQV
TEELFDKVIG VNLKGPFRLT ALVATRMAAG AGGSIINISS SAAVRPMTTD LPYAAAKGGL
NVLTAGFAQA FGPSVRVNTI MAGPFLTDMS RGWDMDALTG DLAHYPMRRA GDPDEVVGAA
VYFASDASSY TTGAVLPVDG GRGVVSFGSA
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