Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4120 |
Symbol | |
ID | 4596634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4351119 |
End bp | 4352051 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639778726 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_925304 |
Protein GI | 119718339 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGGCA TCTGCGACGG TCGCGTCGTC ATCGTCACTG GCGCGGGGCG CGGCCTGGGC CGCGCCCACG CCCTGGAGTT CGCCCGCCAG GGGGCGCGGG TCGTGGTCAA CGACACCGGG GGTGGGGTCG ACGGCACCGG TGGCGACCGG GCTGTGGCCG ACATCGTGGT CGACGAGATC AGGGCGATGG GTGGCCAGGC GGTCGCGAAC TACGCCGACG CCGCCGACTG GGAGGGCTCC GCGACCCTGG TCAGCGACGC CCTCCATGCC TTCGGCCGCC TCGACACACT GGTGAACAAC GCGGGCATCC TGCGCGACCG GATGTTCGTG AACATGACCG TCGAGGAGTG GGACGACGCG ATCCGCGGAC ACCTGCGCAC GACCTTCGCC TGCTCCAAGC ACGCGGTGGC GCACTGGCGA GCAGAGTCCC AGGCTGGCCG CGACGTCGAC GCCCGGATCA TCAACACCTC CTCACCGTCC GGCCTCTACG GCAACGTCGG CCAGAGCAAC TACGGCGCAG CGAAGGCGGG GATCGCGGCC TTCACGATCA TCACCGCGAC CGAGCTGGCC CGTTACGGCA TCACCGTGAA CGCCATCGCC CCGGGGGCCC GCACCCGGAT GACCGAGAAC CTCGCCGTGC TCGACGGTGC CGCCACCGCG GCCGACCACG GGTTCGACGA GATGGCGCCG GAGAACGTCT CCCCCCTGGT CGTCTACCTC GGCAGCAGCC GCTCGGCCCG GATCACCGGC CGGGTCTTCA ACGTGTGGGG TGGCCGGGTC AGCGTCGCCG AGGGCTGGGT CGCCGGCCCG GGTGAGGACC AAGGCGGGCG CTGGACGGTC GACGAGCTCG AAGTGGTGCT GCCCACCCTG GTGGGCCAGG CGGCGTCGAA CGCCGACACC TGGGGCGTGC GCACGGAGTC GTCGCTCGCC TGA
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Protein sequence | MHGICDGRVV IVTGAGRGLG RAHALEFARQ GARVVVNDTG GGVDGTGGDR AVADIVVDEI RAMGGQAVAN YADAADWEGS ATLVSDALHA FGRLDTLVNN AGILRDRMFV NMTVEEWDDA IRGHLRTTFA CSKHAVAHWR AESQAGRDVD ARIINTSSPS GLYGNVGQSN YGAAKAGIAA FTIITATELA RYGITVNAIA PGARTRMTEN LAVLDGAATA ADHGFDEMAP ENVSPLVVYL GSSRSARITG RVFNVWGGRV SVAEGWVAGP GEDQGGRWTV DELEVVLPTL VGQAASNADT WGVRTESSLA
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