Gene Noca_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4120 
Symbol 
ID4596634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4351119 
End bp4352051 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content72% 
IMG OID639778726 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_925304 
Protein GI119718339 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGCA TCTGCGACGG TCGCGTCGTC ATCGTCACTG GCGCGGGGCG CGGCCTGGGC 
CGCGCCCACG CCCTGGAGTT CGCCCGCCAG GGGGCGCGGG TCGTGGTCAA CGACACCGGG
GGTGGGGTCG ACGGCACCGG TGGCGACCGG GCTGTGGCCG ACATCGTGGT CGACGAGATC
AGGGCGATGG GTGGCCAGGC GGTCGCGAAC TACGCCGACG CCGCCGACTG GGAGGGCTCC
GCGACCCTGG TCAGCGACGC CCTCCATGCC TTCGGCCGCC TCGACACACT GGTGAACAAC
GCGGGCATCC TGCGCGACCG GATGTTCGTG AACATGACCG TCGAGGAGTG GGACGACGCG
ATCCGCGGAC ACCTGCGCAC GACCTTCGCC TGCTCCAAGC ACGCGGTGGC GCACTGGCGA
GCAGAGTCCC AGGCTGGCCG CGACGTCGAC GCCCGGATCA TCAACACCTC CTCACCGTCC
GGCCTCTACG GCAACGTCGG CCAGAGCAAC TACGGCGCAG CGAAGGCGGG GATCGCGGCC
TTCACGATCA TCACCGCGAC CGAGCTGGCC CGTTACGGCA TCACCGTGAA CGCCATCGCC
CCGGGGGCCC GCACCCGGAT GACCGAGAAC CTCGCCGTGC TCGACGGTGC CGCCACCGCG
GCCGACCACG GGTTCGACGA GATGGCGCCG GAGAACGTCT CCCCCCTGGT CGTCTACCTC
GGCAGCAGCC GCTCGGCCCG GATCACCGGC CGGGTCTTCA ACGTGTGGGG TGGCCGGGTC
AGCGTCGCCG AGGGCTGGGT CGCCGGCCCG GGTGAGGACC AAGGCGGGCG CTGGACGGTC
GACGAGCTCG AAGTGGTGCT GCCCACCCTG GTGGGCCAGG CGGCGTCGAA CGCCGACACC
TGGGGCGTGC GCACGGAGTC GTCGCTCGCC TGA
 
Protein sequence
MHGICDGRVV IVTGAGRGLG RAHALEFARQ GARVVVNDTG GGVDGTGGDR AVADIVVDEI 
RAMGGQAVAN YADAADWEGS ATLVSDALHA FGRLDTLVNN AGILRDRMFV NMTVEEWDDA
IRGHLRTTFA CSKHAVAHWR AESQAGRDVD ARIINTSSPS GLYGNVGQSN YGAAKAGIAA
FTIITATELA RYGITVNAIA PGARTRMTEN LAVLDGAATA ADHGFDEMAP ENVSPLVVYL
GSSRSARITG RVFNVWGGRV SVAEGWVAGP GEDQGGRWTV DELEVVLPTL VGQAASNADT
WGVRTESSLA