Gene Noca_4111 details

Gene Information

• Locus tag: Noca_4111
• ID: 4596625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4342560
• End bp: 4343195
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639778717
• Product: regulatory protein, TetR
• Protein accession: YP_925295
• Protein GI: 119718330
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.856223
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGATG TCGATGGCGC GGCCGTCGCG GTGCTCACGC CGCGCGCCCA GCGCACCCGC 
GCTGCCCTGC TCGCCTCGGC CCGCAAGGTG TTCGAGCGCG ACGGCTTCCA CAACGCGCGG 
ATCACCGACA TCGCCGACGG CGCGAAGGTC GCGCACGGCA CGTTCTACAC GTACTTCGAC 
TCCAAGGAGA CGATCTTCCT CGCGCTGGTC GACGACATGA TCGCCGACCT CTTCCACGAG 
AACGAGGACC CAGGCACCGC GCGCCAGCAG AGCGGGCTGG AGCCGATCGA GCGCCTGGAG 
CGCAGCAACC GCGAGTACCT CAAGGTCTAC CGCGACAACG GCCGCCTGAT CGCCCTGTGG 
GAGGAGCTCG CCACCCACCA CGAGGGCGCC AAGGCCCGCC TCGACCAGGG TCTGCAGAAG 
TACGTCGAGC GCAGCGAGCG CCAGATCGTC CGGCTCCAGG CCGAGGGACG CGCCGACCGC 
GAGCTCGACC CGCACTACGC GGCCCGGGCG CTGACCGGCA TGGTCTACCG GTTCGCCTAC 
TCCTGGTTCG GCCAGGGGCA CGACTACGAC CTGGACAAGG CCGTCGACAG CCTCACCCGG 
CTCTGGGCCA ACGCGCTCCG GATGGACCAG GACTGA 

 

Protein sequence

MTDVDGAAVA VLTPRAQRTR AALLASARKV FERDGFHNAR ITDIADGAKV AHGTFYTYFD 
SKETIFLALV DDMIADLFHE NEDPGTARQQ SGLEPIERLE RSNREYLKVY RDNGRLIALW 
EELATHHEGA KARLDQGLQK YVERSERQIV RLQAEGRADR ELDPHYAARA LTGMVYRFAY 
SWFGQGHDYD LDKAVDSLTR LWANALRMDQ D