Gene Noca_4102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4102 
Symbol 
ID4596616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4333319 
End bp4334068 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID639778708 
ProductABC transporter related 
Protein accessionYP_925286 
Protein GI119718321 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCG CGAGCTCGGA CCCGGCCCTG CTGGAGGTGT CGAACCTCCG CGTCAGGTTC 
GGTCACGTCG ACGCGGTCCG CGACGTCAGC CTGGCGGTGG GGCGAAGCCG TGTGGTCACC
CTGCTCGGTC CCAACGGGGC GGGCAAGACC ACCACGCTCA AGGCCATCTG CGGCCTCTTG
AGGCCCGCGC GCGGTGAGAT CAGGATCAAC GGCCGCCGCA CCAACGGTGT CGTGGCCTCG
CGCGTCACCA AGCTGGGGGT GGGCTTGGTG CCGGAGGGCC GCCGGATCTT CCCGGCGCAC
ACCGTCAAGG AGAACCTCGA GCTGGGGGGC TTCATCTGGC GGCGTCAGCG CCCGGTCTTC
GACGAGACGC TCGCCTCGGT TCTCGAGCTG TTCCCTCGTC TGGCCGACCG GCTCGACCAA
CTCGCGGGCA GCCTGTCCGG GGGCGAGGCA CAGATGCTGG CCGTGGGTCG CGCGATGATG
ACGCGTCCCA GCCTGCTCAT CCTCGACGAG CCGAGCCTGG GCCTGGCACC CAAGATCGTC
GACGAGCTGT ACGACTTCTT GGGCACGATC CGAGACCAGC AACAGCTGTC GATCCTCCTG
GTCGAGCAGG CGGCCGACCG TGCCCTCCGG TTCGCCGACG ACGCCTATCT CCTGAGCCAG
GGGCGGGTCG TCGCCAGCGG TCCCGCTGAG GCGCTGCGAG AGGACGACCA GGTGCGCAGC
GTGTACTTCG GGGGGCTGGC CACCTCGTGA
 
Protein sequence
MTTASSDPAL LEVSNLRVRF GHVDAVRDVS LAVGRSRVVT LLGPNGAGKT TTLKAICGLL 
RPARGEIRIN GRRTNGVVAS RVTKLGVGLV PEGRRIFPAH TVKENLELGG FIWRRQRPVF
DETLASVLEL FPRLADRLDQ LAGSLSGGEA QMLAVGRAMM TRPSLLILDE PSLGLAPKIV
DELYDFLGTI RDQQQLSILL VEQAADRALR FADDAYLLSQ GRVVASGPAE ALREDDQVRS
VYFGGLATS