Gene Noca_4055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4055 
Symbol 
ID4596569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4277676 
End bp4278365 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID639778661 
Productaspartate racemase 
Protein accessionYP_925239 
Protein GI119718274 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCA TCGGACTCGT CGGCGGGATG AGCTGGGAGA GCAGCGCCGC GTACTACGAG 
GCGCTCAACC AGGGCGTCGA GGAACGGGTC GGCGGGCTGG CGTCCGCGCG GACCGCGATG 
GTCTCGGTGG ACTTCGCCGA GGTCACCGCC CTGCAGGAGC AGGAGCGCTG GGACGACGTC 
GCCGAGATCC TGGCCGGCGC CGCCCGCGGG GTCGAGGCCG CCGGGGCCGA CTTCCTGCTG 
CTGTGCACCA CCACGTTCCA CCGGGTCGCG GACCAGGTGG CCGCGGCCGT GGAAATCCCG 
CTGCTGCACC TGGCCGACGT GGTCGCCGAC GCCTGCAAGG CCGAGCGCCT CGACTCGGTC 
GGCTTCCTCG GGACGACGTT CGCGATGTCC CGCTCGTTCT TCACCGACCG GATCGCCGCG 
CACGGCCTGA CCGTGCACGT CCCGGAGACC CGCCACCACG AGACCCTGAA CCGGGTGATC 
TACGACGAGC TCGTGCACGG CAAGGTGCTC GACAGCTCGC GGCGTACCGT CGTCGGCCTC 
GTCGACGAGC TGTGGGACGC CGGCGCGGGC GGCGTGATCC TCGGCTGCAC CGAGCTCGAG 
CTGCTGGTCC ACCAGGCCGA CGCCGACATC CCGGTCTTCC CCTGCACCAC CCTCCACGTC 
GCGGCCGCCC TCGACCGCGC CCTCGCCTGA
 
Protein sequence
MQTIGLVGGM SWESSAAYYE ALNQGVEERV GGLASARTAM VSVDFAEVTA LQEQERWDDV 
AEILAGAARG VEAAGADFLL LCTTTFHRVA DQVAAAVEIP LLHLADVVAD ACKAERLDSV 
GFLGTTFAMS RSFFTDRIAA HGLTVHVPET RHHETLNRVI YDELVHGKVL DSSRRTVVGL 
VDELWDAGAG GVILGCTELE LLVHQADADI PVFPCTTLHV AAALDRALA