Gene Noca_4025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4025 
Symbol 
ID4596539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4250985 
End bp4251368 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content73% 
IMG OID639778631 
Productnitrite reductase (NAD(P)H), small subunit 
Protein accessionYP_925209 
Protein GI119718244 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID[TIGR02378] nitrite reductase [NAD(P)H], small subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.591303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACCG AGGAGTCGGC AACCGGGCGG TGGCAGCCGG TCTGCCGGGT CGCCGAGCTC 
GAGGTCGAGC GGGGCGCGAC CGCGCTGGTG CACGGCCAGG CGATCGCGAT CTTCCGCACC 
CAGGACGACC GGGTCTACGC GCTGGGCAAC CACGACCCGT TCGCTCGGGC ATCGGTCATC 
GCCCGCGGCA TCGTCGGACT GCGCGGGGAC GTGCCGTTCG TGGCGTCACC GACGCACAAG 
CACGCCTTCG ACCTGCGCAG CGGGCGGTGC CTGGAGGACG ACCACGTGTC GGTCCCGGCC 
TACGAGGTCC GGGTCGCCGA CGGCGTGGTG CTCGTGGGGC ACCGCAAGGC GGTGGTCACG 
CCGACCCGTG GTGACGGGGC GTGA
 
Protein sequence
MGTEESATGR WQPVCRVAEL EVERGATALV HGQAIAIFRT QDDRVYALGN HDPFARASVI 
ARGIVGLRGD VPFVASPTHK HAFDLRSGRC LEDDHVSVPA YEVRVADGVV LVGHRKAVVT 
PTRGDGA