| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4011 |
|---|
| Symbol | |
|---|
| ID | 4598147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4232877 |
|---|
| End bp | 4234082 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639778617 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_925195 |
|---|
| Protein GI | 119718230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.456276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTCC GCATCGTCGC GAACCGGCCG GCCCCCGCCC TCCTCAGGCT GCCGTGGGCG
ACCCCGCTCG AGGAGTGGGT GGAGCACGTG GTGCCGCTCC CCCGCGGCCT GTCGCGGCAC
GTGGTCCGGA TCGTGCGCGT CGAGCAGCGC ACCTACGCGG TCAAGGAGAC CGTCGAGGAG
ATGGCGTTCC GGGAGTACCG GCTGCTGCGC GACCTGCAGC GCCTCGGGCT GCCCGCAGTG
ACCCCGCAGG GCGTCGTGAC GGGCCGGGTC GACGACGACG GCGAGGAGCT GCCGGCGGCG
CTGCTCACCG AGCACCTGCA GTTCTCGCTG CCCTACCGCA GCCTGTTCGC CCACGGCCTC
ACCGCCGCCA ACCTCCCCGA GCTGGTCGAC GCGATGGTGG TGCTCCTCGT CCGGCTGCAC
CTGGCCGACT TCTACTGGGG CGACGTGTCG CTGTCCAACG TGCTGTTCCG GCGCGACGCG
GGCGGGTTCG CGGCGTACCT CGTCGATGCC GAGACCGGCG AGCTCAAGCC CTCGCTGTCG
GACAACCTGC GCGAGTACGA CCTGACCGTG GCGGTCGAGA ACGTCTTCGC CGAGCTGCTC
GACCTGCAGG CCAGCGAGTC ACTCGACCAG GAGGTCCAGG CCCACGCGAT CGTGGAGCTG
CTCGCCGAGC GCTACCACGC GCTCTGGGAC GAGCTGACCC GTCCCGAGGA GTTCTCGAGC
GGTGAGCTCT GGCGCATCGA GCGGCGCGTG GAGCGGCTCA ACGACCTGGG CTTCGACGTC
GACGAGCTCG ACATCGTGAC CGACTGGCAC GGCGAGCGGG TGCGGATCCA GCCCAAGGTC
GTCGAGCTCG GCCACCACAC CCGCGAGCTG CAGGCGCTCA CCGGCCTGGA CGTCGAGGAC
GCCCAGGCCC GGCGGATGCT CAACGACATC GCCTCGTTCA CCGCGCACTT CGACCTGGGC
CGCGAGGACC GCAGCCTGGT CGCGAACAAG TGGCTGACCC AGGTCTACGA GCCGATCATG
GCGATGGTGC CCGCCGAGGC CCGGGGCAAG CTGGAGCCGG CCGAGATCTT CCACGAGATG
CTGGTGCACC GGTGGTACCT CTCGGAGAAC GCCGGCCACG CCATCGACAT CTTCGAGAGC
GCGCGCGACT ACATCGACAA CTACCTGCTC GCCAAGCCCG AGGAGAAGGT CGCCGCTGAC
GACTGA
|
|---|
| Protein sequence | MALRIVANRP APALLRLPWA TPLEEWVEHV VPLPRGLSRH VVRIVRVEQR TYAVKETVEE
MAFREYRLLR DLQRLGLPAV TPQGVVTGRV DDDGEELPAA LLTEHLQFSL PYRSLFAHGL
TAANLPELVD AMVVLLVRLH LADFYWGDVS LSNVLFRRDA GGFAAYLVDA ETGELKPSLS
DNLREYDLTV AVENVFAELL DLQASESLDQ EVQAHAIVEL LAERYHALWD ELTRPEEFSS
GELWRIERRV ERLNDLGFDV DELDIVTDWH GERVRIQPKV VELGHHTREL QALTGLDVED
AQARRMLNDI ASFTAHFDLG REDRSLVANK WLTQVYEPIM AMVPAEARGK LEPAEIFHEM
LVHRWYLSEN AGHAIDIFES ARDYIDNYLL AKPEEKVAAD D
|
|---|
| |