| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3999 |
|---|
| Symbol | |
|---|
| ID | 4598134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4220488 |
|---|
| End bp | 4221264 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639778604 |
|---|
| Product | regulatory protein, TetR |
|---|
| Protein accession | YP_925183 |
|---|
| Protein GI | 119718218 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.163281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGG GAGCGGGAGG CAGGGGCTGG GTCACGGCGG CTCCTGGACG GCGATTATCT
GAACATGTGT CAGATTCGGG TTCATACTCT ACACTCGCTC CCGTGCCTGC TGCGGCGGTG
ACCCCGACCA CCTCCCCGAA GCGACGGGTC CCGCGCCAGG AGCGCAGCCG CCGCCGCGTC
GAGGACCTGC TCGACGCGGC GGCGCGGCTG GTGGTCGAGC ACGGTGTCGA GGCGCTCACC
ACCCGCGAGA TCGCGGAGGC GGCGGGCGTG CCGGTCGCCT CCCTCTACCA GTACTTCGCC
GACAAGGAGG ACGTCATGCT CGCGCTCGCC CAGCGCGACA TGGCGGAGAT GGACGCCCAG
GTCGCCGAGG ACCTCGCCGC CGTCGAGGTG CTCTCGGTCG CGACCCTCGT GCGGACCACC
ATGCGGGCCT TCGTCAGCGT CTACCACCGG CGCCCGGCGT TCGTGGAGAT CTACCTGCGC
GGCCGCACGA ACCTGGCCGT GCACCGCTTC GGTCGCCAGC ACAACGCCCG GATCGCCGAG
ACCCTGCAGG GCTTCGCGAT CGACGCCGGG CTGGCCCGCG CCGACCTGCC GCGCTCGGCC
GCGCTGCTGG CCGTGGAGGT CGGCGACCGC GTCTTCCAGC TCGCGTTCGA GGAGTCCCGC
GACGGCGACC AGGCGCTGGT CGAGGAGGGC ATCGCGATGG TCACCGCCTA CCTCGAGCGC
TACGCCACGC CGGCAGGCCT CACCGGGCCC AGCGGCAGCA CCCAGGAGAG CAGATGA
|
|---|
| Protein sequence | MRAGAGGRGW VTAAPGRRLS EHVSDSGSYS TLAPVPAAAV TPTTSPKRRV PRQERSRRRV
EDLLDAAARL VVEHGVEALT TREIAEAAGV PVASLYQYFA DKEDVMLALA QRDMAEMDAQ
VAEDLAAVEV LSVATLVRTT MRAFVSVYHR RPAFVEIYLR GRTNLAVHRF GRQHNARIAE
TLQGFAIDAG LARADLPRSA ALLAVEVGDR VFQLAFEESR DGDQALVEEG IAMVTAYLER
YATPAGLTGP SGSTQESR
|
|---|
| |