Gene Noca_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3995 
Symbol 
ID4598130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4215244 
End bp4216641 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content73% 
IMG OID639778600 
Productalpha/beta hydrolase fold 
Protein accessionYP_925179 
Protein GI119718214 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCCG TGTCGGGGAG TAGTTTTCCG GGCATGGACC TCGTTCCGAA GCCGGACCAG 
GTGGCGTCCG CAGCGGGCAA CGTCGCGCAC TTGGTGCTGT ACGGCGGCCT CGCGGACCTG
CGGCCGATGC CGCGCACCCT CATCGACGAC GGCACGCTGC GCGAGGTCTA CCACTACCGG
CCGATGGCCG GCGTCCGCGA CCAGGGCGAC CCGGTGCTGC TGGTGACGCC GTTGGCCGCG
CCGGCGATCT GCTTCGACCT GCGCCGGGGC TGCTCGCTGG TCGAGCACTT CGTGCGCGGC
GGCCGCCCGA CGTACCTCGT CGAGTACGGC AACGTCTCCT TCCGCGACCG CAACCTCGGC
CTGGAGCACT GGGTCGAGGA GGTCGTACCG GCTGCGGTGC GCGAGGTGTC GGCGCACGCC
GGTGGCCGGC CCGTGCACGT CATCGGCTGG AGCCTCGGCG GGATCTTCGC GATGCTCGCG
GCGGCCGACT CCCCCGACCT GCCGATCGGC TCGCTCTCGG TGATCGGCTC GCCGGTCGAC
GTGACCCGGG TGCCGCTGGT CGCACCGCTG CGCCCACTGC TCGACCTCAC CGGCGGGCAC
GGGCTGGTGA CCCGGGCCTA CCGGGCCGCC GGCGGGGCGC CCACGCCGCT GGTGCGCTGG
GCGTTCCAGC TCTCGTCGTT CCAGAAGCTG GTCACCAAGC CGCTGGCGAT CGCCACCCAC
CTCGACGACA CCGACTTCCT CGCCCAGATC GAGGCGGTCG ACCGGTTCAC CGCGAAGATG
ACGGCGTACC CGGGCCGTAG CTTCGGCCAG CTCTACCACC GGTTCGCGAA GGGCAACGCG
ATGGCCACCG GGGCCGTCGA GATCGGCGAC CACGACGTCT CGCTCTCGGA GATCTCGGCA
CCGGTCCTGG TGTTCGCCGG CGCGACCGAC GGCATCGCTC CGGTCGAGGC GGTCCGCGCC
GTGCTGCCGC TGCTGTCGGG GGCTCGCGAG GTGCGCTTCG AGATCGTGCC CGGGGGCCAC
CTCGGGATGC TGACCGGCCG CGCCGCGCGC GGCACCACCT GGCAGGTGCT CGACGAGTGG
GTCGAGCAGT GGTCCGGCAG CGAGCCGGCC GCGCCGGCGA GGAAGGCGGC CGCCAAGAAG
GCGGCCACGA AGAAGACCGC CGCCAAGAAG ACCGCCGCCA AGAAGACGGC CACGAAGAAG
ACGGCCACGA AGAAGGCTCC CGCCAAGAAG GCCGCAGCCA CCAAGCCAGC TGCGAAGAAG
GCTGCCGCGA AGAAGGCCCC GGCCAAGAAG ACCCCGGCCC GGAGCACCGG GGCCAAGAAG
GTCGCCTCGG CGGAGACGAT CGGCTCGAAC CCGCGCCGCC GCTACGGGTC CGGCGGATCA
CGCGCCCTCT CCCGCTGA
 
Protein sequence
MTSVSGSSFP GMDLVPKPDQ VASAAGNVAH LVLYGGLADL RPMPRTLIDD GTLREVYHYR 
PMAGVRDQGD PVLLVTPLAA PAICFDLRRG CSLVEHFVRG GRPTYLVEYG NVSFRDRNLG
LEHWVEEVVP AAVREVSAHA GGRPVHVIGW SLGGIFAMLA AADSPDLPIG SLSVIGSPVD
VTRVPLVAPL RPLLDLTGGH GLVTRAYRAA GGAPTPLVRW AFQLSSFQKL VTKPLAIATH
LDDTDFLAQI EAVDRFTAKM TAYPGRSFGQ LYHRFAKGNA MATGAVEIGD HDVSLSEISA
PVLVFAGATD GIAPVEAVRA VLPLLSGARE VRFEIVPGGH LGMLTGRAAR GTTWQVLDEW
VEQWSGSEPA APARKAAAKK AATKKTAAKK TAAKKTATKK TATKKAPAKK AAATKPAAKK
AAAKKAPAKK TPARSTGAKK VASAETIGSN PRRRYGSGGS RALSR