Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3995 |
Symbol | |
ID | 4598130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4215244 |
End bp | 4216641 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639778600 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_925179 |
Protein GI | 119718214 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTCCG TGTCGGGGAG TAGTTTTCCG GGCATGGACC TCGTTCCGAA GCCGGACCAG GTGGCGTCCG CAGCGGGCAA CGTCGCGCAC TTGGTGCTGT ACGGCGGCCT CGCGGACCTG CGGCCGATGC CGCGCACCCT CATCGACGAC GGCACGCTGC GCGAGGTCTA CCACTACCGG CCGATGGCCG GCGTCCGCGA CCAGGGCGAC CCGGTGCTGC TGGTGACGCC GTTGGCCGCG CCGGCGATCT GCTTCGACCT GCGCCGGGGC TGCTCGCTGG TCGAGCACTT CGTGCGCGGC GGCCGCCCGA CGTACCTCGT CGAGTACGGC AACGTCTCCT TCCGCGACCG CAACCTCGGC CTGGAGCACT GGGTCGAGGA GGTCGTACCG GCTGCGGTGC GCGAGGTGTC GGCGCACGCC GGTGGCCGGC CCGTGCACGT CATCGGCTGG AGCCTCGGCG GGATCTTCGC GATGCTCGCG GCGGCCGACT CCCCCGACCT GCCGATCGGC TCGCTCTCGG TGATCGGCTC GCCGGTCGAC GTGACCCGGG TGCCGCTGGT CGCACCGCTG CGCCCACTGC TCGACCTCAC CGGCGGGCAC GGGCTGGTGA CCCGGGCCTA CCGGGCCGCC GGCGGGGCGC CCACGCCGCT GGTGCGCTGG GCGTTCCAGC TCTCGTCGTT CCAGAAGCTG GTCACCAAGC CGCTGGCGAT CGCCACCCAC CTCGACGACA CCGACTTCCT CGCCCAGATC GAGGCGGTCG ACCGGTTCAC CGCGAAGATG ACGGCGTACC CGGGCCGTAG CTTCGGCCAG CTCTACCACC GGTTCGCGAA GGGCAACGCG ATGGCCACCG GGGCCGTCGA GATCGGCGAC CACGACGTCT CGCTCTCGGA GATCTCGGCA CCGGTCCTGG TGTTCGCCGG CGCGACCGAC GGCATCGCTC CGGTCGAGGC GGTCCGCGCC GTGCTGCCGC TGCTGTCGGG GGCTCGCGAG GTGCGCTTCG AGATCGTGCC CGGGGGCCAC CTCGGGATGC TGACCGGCCG CGCCGCGCGC GGCACCACCT GGCAGGTGCT CGACGAGTGG GTCGAGCAGT GGTCCGGCAG CGAGCCGGCC GCGCCGGCGA GGAAGGCGGC CGCCAAGAAG GCGGCCACGA AGAAGACCGC CGCCAAGAAG ACCGCCGCCA AGAAGACGGC CACGAAGAAG ACGGCCACGA AGAAGGCTCC CGCCAAGAAG GCCGCAGCCA CCAAGCCAGC TGCGAAGAAG GCTGCCGCGA AGAAGGCCCC GGCCAAGAAG ACCCCGGCCC GGAGCACCGG GGCCAAGAAG GTCGCCTCGG CGGAGACGAT CGGCTCGAAC CCGCGCCGCC GCTACGGGTC CGGCGGATCA CGCGCCCTCT CCCGCTGA
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Protein sequence | MTSVSGSSFP GMDLVPKPDQ VASAAGNVAH LVLYGGLADL RPMPRTLIDD GTLREVYHYR PMAGVRDQGD PVLLVTPLAA PAICFDLRRG CSLVEHFVRG GRPTYLVEYG NVSFRDRNLG LEHWVEEVVP AAVREVSAHA GGRPVHVIGW SLGGIFAMLA AADSPDLPIG SLSVIGSPVD VTRVPLVAPL RPLLDLTGGH GLVTRAYRAA GGAPTPLVRW AFQLSSFQKL VTKPLAIATH LDDTDFLAQI EAVDRFTAKM TAYPGRSFGQ LYHRFAKGNA MATGAVEIGD HDVSLSEISA PVLVFAGATD GIAPVEAVRA VLPLLSGARE VRFEIVPGGH LGMLTGRAAR GTTWQVLDEW VEQWSGSEPA APARKAAAKK AATKKTAAKK TAAKKTATKK TATKKAPAKK AAATKPAAKK AAAKKAPAKK TPARSTGAKK VASAETIGSN PRRRYGSGGS RALSR
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