| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3994 |
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| Symbol | |
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| ID | 4598129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4213722 |
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| End bp | 4215170 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639778599 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_925178 |
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| Protein GI | 119718213 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAACG TGGCTTCCTC TGGCTCGGCT GACCTGGTCA TCGTCGCGAA CCGACTCCCC
GTCGACCGGG TGCCGCTCGG AGACGGGACG GCCGAGTGGC GGCGCTCACC CGGCGGCCTG
GTCACCGCGA TCGAGCCGGT CATGCGCGCC AACGACGGCA GCTGGATCGG CTGGCCGGGC
GGCACCGAGA GCGACCTGGA GCCCTTCGAG GACGAGGGCC TCGACCTGGT CCCGATCACG
TTGACCCAGC AGGAGGTCGA GGAGTTCTAC GAGGGCTTCG CGAACGGCAC CCTGTGGCCG
CTCTACCACG ACGTCGCCGC GAAGCCGGAG TTCCACCGCG AGTGGTGGGA CGCCTATGTG
GTGGTGAACC GGCGGTTCGC CGAGCAGGCC GCTGCAGCTG CCTCCGAGGG TGCGACCGTG
TGGGTGCACG ACTACCAGCT GCAGCTGGTG CCACAGATGC TGCGCGAGCT GCGCCCGGAC
CTGCGGATCG GGTTCTACCT GCACATCCCG TTCCCGCCCA CCGAGCTGTT CCAGCAGCTG
CCCTGGCGAC GCCAGCTGCT CGAGGGCCTG CTGGGCGCCG ACCTGGTCGG CTTCCAGCTC
CCCGGCGCCG CGCAGAACTT CGTGCGACTG GTCCGCCAGC GGGTCGGGCA CAAGACGCAC
CGCGACCTCG TCTACCTGCC CGACGGCCGC ACCGTGCGGG CCGCAGCGTT CCCGATCTCC
ATCGACGCGA AGGGCTTCGA GGACCTGGCT CGCTCCGAGG AGGTCGAGAA GCGCGCCGCC
GAGATCCGCG ACGCCCTGGG CAACCCGAGC CGGATCTTCC TCGGCGTCGA CCGACTCGAC
TACACCAAGG GCATCTACGC CCGGCTCCGC GCCTACAGCG AGCTGCTGGC GCAGGGCGAC
CTCGACGTCG AGGACGCGGT GTTCGTGCAG GTGGCGACGC CCTCGCGCGA GCAGGTCGAG
CAGTACCGCA TCCTCCGCGA CGACATCGAC CGCCTCGTGG GGCGGATCAA CGGCGACCTC
GGGCGGATCG GCCGGCCGGC GATCAGCTAC ATGCACGCGT CGTACCCCCG CGAGGAGATG
GCGGCGCTCT ACCGCGCCGC CGACATCATG GTGGTGACGC CGTACCGCGA CGGCATGAAC
CTGGTCGCCA AGGAGTACGT CGCCTGCCGC TTCGACAACG ACGGCGCACT GGTGCTCTCG
GAGTTCGCGG GCGCGGCCGA CGAGCTGCGG CAGGCCTGGC TGGTCAACCC CTACGACATC
AACGGGATGA AGTCCGCACT GCTGGAGGCC TACCGCGCCG ACGAGAAGGA GCGGACCCGG
CGGATGAAGG CGATGCGCAA GACCGTCAGC CAGAACGACG TCGCCGCCTG GGCCGACAGC
TTCCTCGCCG AGCTCACCGC CGTGCGGCCC TCGCACGGCA AGACCGTGCG GCCCGCCCGG
CGGTCCTGA
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| Protein sequence | MKNVASSGSA DLVIVANRLP VDRVPLGDGT AEWRRSPGGL VTAIEPVMRA NDGSWIGWPG
GTESDLEPFE DEGLDLVPIT LTQQEVEEFY EGFANGTLWP LYHDVAAKPE FHREWWDAYV
VVNRRFAEQA AAAASEGATV WVHDYQLQLV PQMLRELRPD LRIGFYLHIP FPPTELFQQL
PWRRQLLEGL LGADLVGFQL PGAAQNFVRL VRQRVGHKTH RDLVYLPDGR TVRAAAFPIS
IDAKGFEDLA RSEEVEKRAA EIRDALGNPS RIFLGVDRLD YTKGIYARLR AYSELLAQGD
LDVEDAVFVQ VATPSREQVE QYRILRDDID RLVGRINGDL GRIGRPAISY MHASYPREEM
AALYRAADIM VVTPYRDGMN LVAKEYVACR FDNDGALVLS EFAGAADELR QAWLVNPYDI
NGMKSALLEA YRADEKERTR RMKAMRKTVS QNDVAAWADS FLAELTAVRP SHGKTVRPAR
RS
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