Gene Noca_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3963 
Symbol 
ID4598098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4177092 
End bp4177760 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content75% 
IMG OID639778568 
Productmethyltransferase small 
Protein accessionYP_925147 
Protein GI119718182 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.871033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGTCA CCGGCAGCGG GTACCACGAC GCCATGACCA CGATCAGCCA CGCTCCGGAG 
ACGATGGGCT TCGGCCCGCT CCGGATCAGC TTCGACGGCC GGGTGCTACG CCCTCGGCCG 
TGGACCGCGG CCCAGTCGGA GTGGGCCGCC GAGATCCTCG CGGACGCACC CCCGGGCCCG 
GTGCTCGAGC TGTGCGCCGG TGCCGGCCAG ATCGGCCTGC TCGCCGTGGC CGGCTCGGAC 
CGGCCGCTGG TGTGCGTGGA CGTGAACCCG GTGGCCTGCG ACTACGCCCG GGCCAACGCC 
CAGGCCGCGG GCCTGGCCGA CCGGGTCGAG GTCCGCGAGG GCTCGGTGCA CGAGGTGCTC 
GGCGACAGCG AGCGGTTCGC CCTGGTCATC GCGGACCCGC CGTGGGTACG CCGCGAGGAG 
GTCGCCCGCT TCCCCGAGGA CCCGGTGCTG GCCATCGACG GCGGGGCGGA CGGGATGGCC 
CTGGCCTGGT TGTGCATCGA CACCGCCCGC CCGCACCTGC CCCGGGGCGC CAGTGTGCTG 
CTCCAGCTGG GCAGCGTGGA GCAGGTCGAC CTGCTGCGCG AGCGGCTCCG GGAGACCGAC 
GACGAGCTGG CCATCAGCGA GCTCCGCTGG TGCGAGCGAG GCGTGCTGGT CCGGCTCGAC 
GCGACCTGA
 
Protein sequence
MPVTGSGYHD AMTTISHAPE TMGFGPLRIS FDGRVLRPRP WTAAQSEWAA EILADAPPGP 
VLELCAGAGQ IGLLAVAGSD RPLVCVDVNP VACDYARANA QAAGLADRVE VREGSVHEVL 
GDSERFALVI ADPPWVRREE VARFPEDPVL AIDGGADGMA LAWLCIDTAR PHLPRGASVL 
LQLGSVEQVD LLRERLRETD DELAISELRW CERGVLVRLD AT