Gene Noca_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3962 
Symbol 
ID4598097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4176400 
End bp4177014 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content74% 
IMG OID639778567 
ProductDNA-N1-methyladenine dioxygenase 
Protein accessionYP_925146 
Protein GI119718181 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.257753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCC AGGGAACGCT GTTCGGGGCC CCGCCGGCGA CCGCTCCGGT CTTCGACCTC 
CTGGAGCGCC AGGTGCTCAC CCGTGGCGCC TGGGTCGACG TGTGCCGGAC CTGGCTGCCC 
GAGGCCGACG ACGTCCTCGC GACGCTGCTC CGCGAGGTCC CGTGGCGGTC CGAGCGCCGC 
CAGATGTACG ACCGCGAGGT CGACGTACCC CGCCTCCTGC ACACGTACGG CGTCGGCGAG 
CCGCTGCCCC ACCCGGCCCT GGCGCGCGCC CGCGGCGCGC TGTCCGCCCA CTACCGGCCC 
GAGCTCGGCG AGCCGTTCGT CACGGCCGGC TGCTGCTACT ACCGCGACGG CCGCGACAGC 
GTCGCCTGGC ACGGCGACAC CATCGGGCGC GGCAGGACCC AGGACACGAT GGTCGCGATC 
GTCTCGCTCG GCGACCCGCG CCGGCTGATG CTGCGGCCCC GGCTCGGAGG TGAGTCCATC 
TCGGTCGAGA TGGGCCACGG CGACCTGCTG GTGATGGGCG GCTCGTGCCA GCGCACCTGG 
GAGCACGCCG TCCCCAAGGT CGCGCATGCC GGGCCCCGGA TCTCGGTCCA GTTCCGCCCG 
CTCGACGTGG CCTGA
 
Protein sequence
MDFQGTLFGA PPATAPVFDL LERQVLTRGA WVDVCRTWLP EADDVLATLL REVPWRSERR 
QMYDREVDVP RLLHTYGVGE PLPHPALARA RGALSAHYRP ELGEPFVTAG CCYYRDGRDS 
VAWHGDTIGR GRTQDTMVAI VSLGDPRRLM LRPRLGGESI SVEMGHGDLL VMGGSCQRTW 
EHAVPKVAHA GPRISVQFRP LDVA