Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3961 |
Symbol | |
ID | 4598096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4175496 |
End bp | 4176263 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639778566 |
Product | ABC transporter related |
Protein accession | YP_925145 |
Protein GI | 119718180 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.538851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGG CCACCCTCCA GGGGACCCCC GTCCCTCCGG CAGCGCGCGT GCGCAACCTC ACCAAGACCT ACGGCTCCGG CCCGGCGATG GTGGTCGCGC TCGACGACGT CAGCCTCGAC CTCGCGGCCG GCGAGTTCAC GGCGGTGATG GGCCCGAGCG GCTCGGGCAA GTCCACGCTG ATGCACTGCT GCGCGGCGCT GGACCGGGCC GACTCCGGCT CGGTGTTCAT CGGCGACCAG GACCTGACCA CCCTCAAGGA CAAGGCCCTC ACCCGCCTGC GCCGCGACGA GATCGGCTTC GTCTTCCAGT CCTTCAACCT GGTGCCGACC CTGTCTGCGG CCGAGAACAT CGCGCTTCCG TTGGCGATCG CGGGCCGCCG CCCCGACCGC GAGTGGTACG ACGCGGTCAT CGACACGGTG AGCCTGTCCG ATCGGCTCGA CCACAAGCCC AACGAGCTCT CCGGGGGCCA GCAGCAGCGG GTCGCGGTCG CCCGGGCGCT CGTCAGCAGG CCGCGGATCG TCTTCGCCGA CGAGCCGACC GGCAACCTCG ACTCCCGCTC CGGCGCCGAG GTCCTCGAGC TGCTGCGCCG CAGCGTCGAC GACTACGGCC AGACGGTCGT GATGGTGACC CACGACCCCG TGGCCGCGGC GTACACCGAC CGGGTCGTCT TCCTCGGTGA CGGCCGGGTC GTCGACGAGC TGCGCGAGCC CACCCGCGAG CGGGTACTCG AGGTCATGAA CCGCCTGGCC GAGCAGCACG CCCGATGA
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Protein sequence | MTEATLQGTP VPPAARVRNL TKTYGSGPAM VVALDDVSLD LAAGEFTAVM GPSGSGKSTL MHCCAALDRA DSGSVFIGDQ DLTTLKDKAL TRLRRDEIGF VFQSFNLVPT LSAAENIALP LAIAGRRPDR EWYDAVIDTV SLSDRLDHKP NELSGGQQQR VAVARALVSR PRIVFADEPT GNLDSRSGAE VLELLRRSVD DYGQTVVMVT HDPVAAAYTD RVVFLGDGRV VDELREPTRE RVLEVMNRLA EQHAR
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