Gene Noca_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3959 
Symbol 
ID4598094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4171956 
End bp4172615 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content72% 
IMG OID639778564 
ProductGntR family transcriptional regulator 
Protein accessionYP_925143 
Protein GI119718178 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0354607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCACTC TCGTCACGGG GGCGGCACCC GGTTCACCTG CACCGTCTGA GCGTGAGCTG 
GTGCATCGGT TCGGGGTCGC CCGCATGACG GTGAGACAAG CTATGGATGC CCTCGTGGTC 
GAGGGCCTTC TCGAGCGGAT TCCCGGGCGG GGCACTTTCG TGGCCCGCCC GCGGCGGGCC 
GTGAGCCGAT TGACGAGCTA CACCGAGGAG ATGGCGCGAC GCGGCCTGCT GGCCGAGTCG 
CAGACCCTCC TCGCGCGGCG CGAGCAGGCC GGGCCCGGCG TGGCGCGGGC GCTGAACGTG 
ACGGAGGGGG ACGCGGTCAT CCATTGGCGG CGGCTCCGCC GGGCGGACAG CGCGCCGATG 
TGCGTGGAGG ACGCCTACCT CAACGAGGTG CTGCTGCCCG GCTTCCTGCA GAGCGGCATG 
CCGACCAGCC TGTACGACGC GCTGGACTCC CGCGCCCTGC GCCCGAACTG GGCCGAGGAC 
TCGATCAACG CCGACGTGGC CAGCGAGGAG GAGGCCGGCC TGCTGGACAT CACCGCCGGC 
ACCCCGGTGC TGCGCCACTC GCGTCGCGCG CTGTGCGGGG AGAAGGTCGT CGAGGTCTCG 
CGCACGGTCT ACCGGGCCGA CCGGTTCACC ATGTGGATCC AGGTGGGCTC GGAGAGCTAG
 
Protein sequence
MRTLVTGAAP GSPAPSEREL VHRFGVARMT VRQAMDALVV EGLLERIPGR GTFVARPRRA 
VSRLTSYTEE MARRGLLAES QTLLARREQA GPGVARALNV TEGDAVIHWR RLRRADSAPM 
CVEDAYLNEV LLPGFLQSGM PTSLYDALDS RALRPNWAED SINADVASEE EAGLLDITAG 
TPVLRHSRRA LCGEKVVEVS RTVYRADRFT MWIQVGSES