| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3949 |
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| Symbol | |
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| ID | 4598084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4161334 |
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| End bp | 4162689 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639778554 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_925133 |
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| Protein GI | 119718168 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.334602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG ACCAGGTCAT GTTCACGCTG GACGAGTCCG AGCAGGTCAC CCACTGGTAC
AACATCGTGG CGGACCTGCC GACGCCGCCC CCGCCGCCGC TCCACCCCGG CACCCACGAG
CCGGTCGGAC CCGACGACCT GGCCGCACTG TTCCCGATGG AGCTGATCCT CCAGGAGGTC
AGCGGCGAGC GGTACGTCGA GATCCCGGAG CCGGTGCGCG AGGTCTATCG CCAGTACCGG
CCCAGCCCGC TCTACCGCGC CCGCCGCTGG GAGCAGAAGC TCGGCACCAC GGCGCGGATC
TACTACAAGT ACGAGGGCGT CTCGCCCGCC GGGTCGCACA AGACCAACAC CTCGGTGCCG
CAGGTCTACT ACAACTCCCT GCACGGGGTG CGCCGGCTCA CGACCGAGAC GGGCGCCGGC
CAGTGGGGCA CCGCGCTGGC CTACGCGTGC TCCCTGTTCG ACGTGGAGTG CGAGGTCTGG
CAGGTCGGCG CGTCGTACGA CTCCAAGCCG CAGCGCCGGA CGCTGATCGA GGTGTTCGGC
GGCTCCGTGC ACCGCTCCCC GAGCCGGCTC ACCGAGTCCG GCAAGGCGTT CCCCGACGGA
CACCCGGGGT CACTGGGCAT CGCGATCTCC GAGGCGGTCG AGGTCGCCGC CCAGGACGAG
ACGACCAAGT ACGCCCTCGG CTCGGTGCTC AACCACGTGC TGCTGCACCA GACCGTGATC
GGCGAGGAGA CGCTGCGCCA GCTGGCCAAG GCCGGTGAGT CCGGCGCCGA CCTCGTGGTC
GGCTGCGCCG GCGGCGGGTC GAACTTCGCC GGCCTCGCCT TCCCGTTCCT GCGCGAGAAG
CTGGCCGGCA CGCAGGCTCC CCGGATCCTG GCGGTCGAGC CCACGTCCTG CCCGACCCTG
ACCCGGGGCG AGTACCGCTA CGACTTCGGC GACACCGCCG GGCTGACACC CTTGATGAAG
ATGTACACGC TCGGCCACGA CTTCGTGCCG TCGCCGATCC ACGCGGGCGG GCTGCGCTAC
CACGGCATGG CGCCGCTGGT CTCGCACGCC GTGCACGAGG GCCTGATCGA GGCCACCGCG
CTGCACCAGA GCGAGTGCTT CGAGGCTGGC CTGGAGTTCG CCCGCACCCA GGGCATCGTC
GCGGCGCCCG AGTCCTCGCA CGCGCTGGCC CAGGCCCGCC GCGAGGCGCT CGCCGCGACC
GAGTCCGGGG CGGAGCCGGT GATCGTCGTC GGGCTCTCCG GGCACGGCCT GCTCGAGCTC
GGTGCCTACG AGTCGTTCCT CTCCGGCCAC CTCGAGGACG ACCCGCTGTC CGACGCGGAC
CTCACCGCGG CGCTGGCGGG CATCCCGCAG GTCTGA
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| Protein sequence | MNDDQVMFTL DESEQVTHWY NIVADLPTPP PPPLHPGTHE PVGPDDLAAL FPMELILQEV
SGERYVEIPE PVREVYRQYR PSPLYRARRW EQKLGTTARI YYKYEGVSPA GSHKTNTSVP
QVYYNSLHGV RRLTTETGAG QWGTALAYAC SLFDVECEVW QVGASYDSKP QRRTLIEVFG
GSVHRSPSRL TESGKAFPDG HPGSLGIAIS EAVEVAAQDE TTKYALGSVL NHVLLHQTVI
GEETLRQLAK AGESGADLVV GCAGGGSNFA GLAFPFLREK LAGTQAPRIL AVEPTSCPTL
TRGEYRYDFG DTAGLTPLMK MYTLGHDFVP SPIHAGGLRY HGMAPLVSHA VHEGLIEATA
LHQSECFEAG LEFARTQGIV AAPESSHALA QARREALAAT ESGAEPVIVV GLSGHGLLEL
GAYESFLSGH LEDDPLSDAD LTAALAGIPQ V
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