Gene Noca_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3944 
Symbol 
ID4598079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp4154003 
End bp4154509 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content76% 
IMG OID639778549 
ProductAsnC family transcriptional regulator 
Protein accessionYP_925128 
Protein GI119718163 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.134648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAGA ACCCGCCGCG GCTGCCGCCC GGCCCGCCGC CCCGCGAGCG CCCGGTCCTC 
GACGAGGTCG ACCGGGCCCT GGTCGCTGCG CTGCTGCGCG ACGGCCGGAC CCCCAACGTG 
GAGCTGGCCC GCGCGACCGG CATCGCGGAG TCGACGTGCC TGGCCCGGGT CCGCGGCCTG 
CGCGAGCGCG GCATCGTCAC CGGGGTCACC GCCGACGTCG ACCTGGCCCG CCTGGGACTG 
CCGGTGCAGG CCATGGTCAC GGTGCGCTTC TCCGGCCACC TGCGCGCCGA CGTGGACGCC 
TTCGCCGAGG AGGTGACCGG CCTGCCCGGC GTGCTGGCGG CGTACAACAT CTCCGGCGCC 
AACGACTTCC TGGTGCACGT CGCGACCGGC ACGCCGGAGG CCCTGCGGGA CTTCGTGCTC 
GACAACCTGA CCGGCCGGCC CGGTGTCGTG CACGCCGAGA CCAGCCTGGT CTTCCACGCG 
ACCCGGGGCC GCACCGTCCT CGCCTGA
 
Protein sequence
MPKNPPRLPP GPPPRERPVL DEVDRALVAA LLRDGRTPNV ELARATGIAE STCLARVRGL 
RERGIVTGVT ADVDLARLGL PVQAMVTVRF SGHLRADVDA FAEEVTGLPG VLAAYNISGA 
NDFLVHVATG TPEALRDFVL DNLTGRPGVV HAETSLVFHA TRGRTVLA