| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3922 |
|---|
| Symbol | |
|---|
| ID | 4598057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4128474 |
|---|
| End bp | 4129667 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639778528 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_925107 |
|---|
| Protein GI | 119718142 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAAGG CGAAGTTCGA GCGGACCAAG CCGCACGTCA ACATCGGCAC CATCGGTCAC
ATCGACCACG GCAAGACGAC GCTCACGGCG GCGATCACCA AGGTGCTGCA CGACAAGTAC
CCGGACCTGA ACCCCTTCAC GCCGTTCGAC GAGATCGACA AGGCCCCTGA GGAGCGTCAG
CGCGGTATCA CCATCTCGAT CGCGCACGTC GAGTACCAGA CCGAGTCGCG GCACTACGCG
CACGTCGACT GCCCGGGTCA CGCGGACTAC ATCAAGAACA TGATCACCGG TGCCGCGCAG
ATGGACGGCG CGATCCTCGT GGTCGCCGCC ACCGACGGCC CGATGCCGCA GACCCGTGAG
CACGTGCTGC TGGCCCGCCA GGTCGGCGTG CCCGCCCTGG TCGTCGCGCT CAACAAGTGC
GACATGGTCG ACGACGAGGA GCTCATCGAG CTCGTCGAGA TGGAGGTGCG CGAGCTCCTC
TCCGAGTACG AGTTCCCGGG CGACGACATC CCGGTCGTGC GCGTGGCGGC CTTCCCGGCC
CTCAACGGCG ACGCCAAGTG GGGCGAGTCG GTCCTCGAGC TGATGAACGC GGTCGACGAG
TACATCCCGA CCCCGGAGCG CGACACCGAG AAGCCGTTCC TGATGCCGGT CGAGGACGTC
TTCACGATCA CCGGTCGCGG CACGGTCATC ACCGGCCGGA TCGAGCGCGG CATCGTCAAG
GTCGGCGAGG AGGTCGAGAT CCTCGGCATC CGCGAGGCCT CGCAGAAGAG CACCGTCACC
GGTGTCGAGA TGTTCCGCAA GCTGCTCGAC GAGGGCCAGG CCGGTGAGAA CGTCGGTCTG
CTGCTCCGCG GCACCAAGCG CGAGGACGTC GAGCGCGGCA TGGTCGTCGC CAAGCCCGGC
ACCACGACCC CGCACACCAA CTTCGAGGCC TCGGTCTACA TCCTCTCGAA GGAGGAGGGC
GGCCGCCACA CGCCGTTCTT CAACAACTAC CGCCCGCAGT TCTACTTCCG GACCACGGAC
GTGACCGGCG TGGTGACCCT CCCCGAGGGC ACCGAGATGG TCATGCCGGG CGACAACACC
GAGATGGCCG TCGAGCTGAT CCAGCCGATC GCCATGGACG AGGGTCTGCG CTTCGCGATC
CGCGAGGGCG GCCGCACCGT CGGCGCCGGC CGGGTCACCA AGATCACGAA GTGA
|
|---|
| Protein sequence | MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDKY PDLNPFTPFD EIDKAPEERQ
RGITISIAHV EYQTESRHYA HVDCPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTRE
HVLLARQVGV PALVVALNKC DMVDDEELIE LVEMEVRELL SEYEFPGDDI PVVRVAAFPA
LNGDAKWGES VLELMNAVDE YIPTPERDTE KPFLMPVEDV FTITGRGTVI TGRIERGIVK
VGEEVEILGI REASQKSTVT GVEMFRKLLD EGQAGENVGL LLRGTKREDV ERGMVVAKPG
TTTPHTNFEA SVYILSKEEG GRHTPFFNNY RPQFYFRTTD VTGVVTLPEG TEMVMPGDNT
EMAVELIQPI AMDEGLRFAI REGGRTVGAG RVTKITK
|
|---|
| |