| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3921 |
|---|
| Symbol | |
|---|
| ID | 4598056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 4126835 |
|---|
| End bp | 4128187 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639778527 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_925106 |
|---|
| Protein GI | 119718141 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGGGCG TGCTGGACCG CCACCGCCTC GCCGAGCTCC GAACGACCGA GGAGGAGCGG
TTCGTCGCCG CTCGTCCGCG CTCAGCCGCG CTGGCGGCAC GGGCCCGCGG GCCGTTGCTG
GCCGGCGTGC CGATGCCGTG GATGACCCGC TGGCCGGGCC GCTTCCCGGT GTTCTTCGAG
TCCGCCACGG GCGCCCGACT CGTCGACGTC GACGGGCACG AGTACGTCGA CCTGTGCCTG
GGCGACACCG GCGCGATGAC GGGGCACGCG CTGCCGCAGG TGGCCGACGC CCTGGCCGCC
CGCGCCCGCA GTGGCATCAC CACGATGCTC CCGTCGGCGG ACGCCGTGTG GGTCGGCGAG
GAGCTCGCCC GGCGCTTCGG GCTGCCGACG TGGCAGCTCG CGATGTCGGC GACCGACGCG
AACCGGTTCG TGCTGCGCTT CGCCCGGCAC CTGACCGGGC GACCGAGGAT CGCGGTCATG
GACTGGTGCT ACCACGGCAC GGTGGACGAG ACTCTCGCCG TCCTCGACGG TGACCGAGTC
GTCCCGCGTC CGGGCGCGCT CGGGCCGCAG GTGCCGGTCG CGGAGACGAC GGCGGTGGTT
CCCTTCAACG ACGCCGAGGC GCTCGAGCGC CGGCTGGCCG TCGGGGACGT GGCGTGCCTC
CTCATGGAGC CCGCGCTGAC CAACATCGGC ATCGTGCTGC CCGAACCGGG CTACCTCGAG
GCCGTCCGCG AGATCACCCA CCGCCATGGC GTGCTGCTGG TGATCGACGA GACCCACACC
CTGTGCACCG GGCCCGGCGG CGCCACCGCC GCGTGGGGCC TGGAGCCGGA CCTGGTCGTG
GTCGGCAAGC CGATCGGCGG CGGGGTGCCG TGCGCGGCGT ACGGCATGAG TGCCGCGGTC
GCCGACCGGC TCTCCGGCCC GATGCTCGGC CACGAGATCG ACGTCGCCGG CGTCGGCGGG
ACCCTCACCG GCAACGCCCT GGCCCTGGCC GCGATCCGGG CCACCCTGTC GACCTGCCTG
CGCGAGGAGG ACTTCACCGT CGCGATCCCG CTCGCCGAGC GCTTCACCGA CGGCGTGGCC
GGCGTGATCG CCGAGCACCG GCTGCCCTGG CACGTGCAGC GGCTCGGCTG CCGGGCGGAG
TACTGGTTCT GCCCGCCCCC GCGCGACGGC GCGGCCGCGG CCGCCGCGGT CGACGAGGAG
CTCGAGGGCT TCTTGCACCT GTGGTGCCTC AACCGGGGCG TGCTGCTCAC CCCGTTCCAC
AACATGGCGC TGTTCTCCCC CGCCCACACC CCCGCCGACG TGGACCGGCA CACCGAGGTC
TTCGGCGAGG CCGTCGCCGC GCTGCTCGCC TGA
|
|---|
| Protein sequence | MTGVLDRHRL AELRTTEEER FVAARPRSAA LAARARGPLL AGVPMPWMTR WPGRFPVFFE
SATGARLVDV DGHEYVDLCL GDTGAMTGHA LPQVADALAA RARSGITTML PSADAVWVGE
ELARRFGLPT WQLAMSATDA NRFVLRFARH LTGRPRIAVM DWCYHGTVDE TLAVLDGDRV
VPRPGALGPQ VPVAETTAVV PFNDAEALER RLAVGDVACL LMEPALTNIG IVLPEPGYLE
AVREITHRHG VLLVIDETHT LCTGPGGATA AWGLEPDLVV VGKPIGGGVP CAAYGMSAAV
ADRLSGPMLG HEIDVAGVGG TLTGNALALA AIRATLSTCL REEDFTVAIP LAERFTDGVA
GVIAEHRLPW HVQRLGCRAE YWFCPPPRDG AAAAAAVDEE LEGFLHLWCL NRGVLLTPFH
NMALFSPAHT PADVDRHTEV FGEAVAALLA
|
|---|
| |