Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3916 |
Symbol | |
ID | 4598051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4122046 |
End bp | 4122975 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639778522 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_925101 |
Protein GI | 119718136 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.228391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCG CCGTCCCCGA GCAGAAGGGC GTCGAGGCCG TGGTGGCCCA GGAGCCCGTG ACCGCCACCG CCAAGCGTGC GCTGAGCTCG CCGTGGGCAT CGCTCGCGGC GATCATCATC GCCGTCCTGT GGACCATCCC GACCTTCGGC CTGCTGGTGA CCTCGTTCCG GCCCGAGTCC GCGATCACGA CCAGCGGCTG GTGGACGGCA CTGTGGAACG GCGGCTGGAC ACTGGACAAC TACGACCAGG TCCTCAACGG CAGTGACACC AACCTGGGCA CGTACTTCGT GAACTCGCTG GTGATCACGG TCCCGTCCGT GCTGATCCCG ATCAGCATCG CGGTGATGGC GGCCTACGCC TTCGCCTGGA TGAAGTTCCC CGGCCGCGAC TTCTTGTTCG TCGCGATCTT CGCGCTGCAG ATCGTGCCGA TCCAGGTCAC GATGATCCCG CTGCTGAAGC TCTACGTGAA CCAGGGTTTC GCCGGTTCCG AGGCACCCGG CGGCGGCTTC TACACGATCT GGCTGTCGCA CTCGATCTTC GCGCTGCCCC TGGCGATCTA CCTGCTGCAC AACTTCATGA GCCAGATCCC CGGCGAGCTG ATCGAGTCGG CGCGCGTCGA CGGCGCCGCC CACGTCCAGA TCTTCACCCG GATCATGCTG CCCCTGATGG CGCCCGCCAT CGCCGCGTTC GGGATCTTCC AGTTCCTCTG GGTCTGGAAC GACCTGCTCG TCGCGCTCGT CTTCGGCGGC GGCAGCCTGG AGATCTCGCC GCTCACCGTC CGGCTCGCCG AGCTGTCCGG CACCCGCGGC AACGACTGGT TCCTGCTGTC CGCCGGCGCC TTCGTCTCGC TGGTCATCCC GCTGATCGTG TTCCTGTCGC TGCAGCGGTA CTTTGTCCGC GGCCTGCTGG CGGGCAGCGT CAAGGGGTAG
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Protein sequence | MSTAVPEQKG VEAVVAQEPV TATAKRALSS PWASLAAIII AVLWTIPTFG LLVTSFRPES AITTSGWWTA LWNGGWTLDN YDQVLNGSDT NLGTYFVNSL VITVPSVLIP ISIAVMAAYA FAWMKFPGRD FLFVAIFALQ IVPIQVTMIP LLKLYVNQGF AGSEAPGGGF YTIWLSHSIF ALPLAIYLLH NFMSQIPGEL IESARVDGAA HVQIFTRIML PLMAPAIAAF GIFQFLWVWN DLLVALVFGG GSLEISPLTV RLAELSGTRG NDWFLLSAGA FVSLVIPLIV FLSLQRYFVR GLLAGSVKG
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