Gene Noca_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3874 
Symbol 
ID4598009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4092090 
End bp4092698 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID639778480 
Product50S ribosomal protein L17P 
Protein accessionYP_925059 
Protein GI119718094 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGC CCACCAAGGG TCCCCGCCTC GGCGGCAGCC CGTCCCACCA GCGCCTGATC 
CTGTCGAACC TGGCCACCCA GCTGTTCGAG CACGGCCGGA TCACGACCAC CGAGTCGCGG 
GCGCGCGCGC TGCGTCCGCA CGCGGAGAAG CTGATCACCA AGGCGAAGAA GGGCGACCTG 
CACAACCGTC GTGAGGTCCT CAAGACCATC CGCGACAAGT CGGTCGTCCA CACCCTCTTC 
ACCGAGATCG CGCCGACCTT CGCCGAGCGT CCGGGTGGCT ACACCCGGAT CACGAAGATC 
GGTCCCCGCA AGGGCGACAA CGCCCCGATG GCCGTCATCG AGCTCGTGAC CGAGGCCTAC 
AAGCCGTCGG CCCCGAAGGC GAAGAAGGCC GCACCGGCCG CAACCGCCCC GGCGCCGGTC 
GAGGAGGCGC CCGCCGAGGA GACCGTGGCC GAGGAGACGG CTGTCGAGGA GGCTCCCACC 
GAGCTGACCG ACGAGGCGTC GCCCGAGGAG AGCGTGGTCA CCGAGGAGCA GCCCGTCGAG 
GACGAGGCCG CCACCGAGGA GCCAGCCGCG GAGAGCACCG AGGAGAGCAC CGAGGACGAC 
AAGGCCTGA
 
Protein sequence
MPKPTKGPRL GGSPSHQRLI LSNLATQLFE HGRITTTESR ARALRPHAEK LITKAKKGDL 
HNRREVLKTI RDKSVVHTLF TEIAPTFAER PGGYTRITKI GPRKGDNAPM AVIELVTEAY 
KPSAPKAKKA APAATAPAPV EEAPAEETVA EETAVEEAPT ELTDEASPEE SVVTEEQPVE 
DEAATEEPAA ESTEESTEDD KA