| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3871 |
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| Symbol | |
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| ID | 4598006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4089775 |
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| End bp | 4090581 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639778477 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_925056 |
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| Protein GI | 119718091 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGATCC GGCTCGACCT CGCCTACGAC GGCACCGACT TCCACGGCTG GGCGAGCCAG
CCGGGGCTGC GGACCGTGCA GGGCGAGCTG AGCGACGCCC TCGCGACGGT GCTGCGGGTC
CCGGAGGTCG CCGTGGTCTG CGCCGGCCGC ACCGACGCCG GCGTCCACGC GCGCGGCCAG
GTGGTGCACG CCGACCTGGA CGGCCTCGAG CCGGCCACCG TCGAGGGGCT GGTACGGCGG
CTCAACGGGC GACTGCCCGC CGACGTACGG GTGCGCCGGG CGGTCGAGGC GCCCGCGGGG
TTCGACGCCC GGTTCGGGGC ACTGTGGCGG CGCTACGCCT ACCGGATCGC CGACACCCCG
GCCGTAGTGG ACCCGCTGAC CCGCTCCCAC GTCCTGGCCT GGCCACGAGC CCTGGACCTC
GACGCGATGA ACGCGGCGTC CGCGTTCCTG GTCGGCCGGC ACGACTTCGC GTCCTTCTGC
AAGCAGCGGG AGGGCGCGAC CACGATCCGG ACCCTGCTTG AGCTGTCCTG GGCGCGGGAC
CCGGCCGGCG TGCTGGTCGG GACGGTCCGC GCCGACGCGT TCTGCCACAG CATGGTCCGG
TCCCTGGTCG GCTGCCTGAT CGCCGTCGGG GAGGCGCGCA AGCCGGTCGC CTGGGCCGAG
GACATCCTGC GGGCGGAGGC GCGTGATCCC GCGGTGGCGG TCGTGCACGC CCACGGCCTC
ACGCTGGAGG AGGTCGCCTA CCCGGCCGAC GACGAGCTCG CCGCCCGGGC CGAGCAGACA
CGAGCGAAGA GGGTCGCCGA TGAGTGA
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| Protein sequence | MRIRLDLAYD GTDFHGWASQ PGLRTVQGEL SDALATVLRV PEVAVVCAGR TDAGVHARGQ
VVHADLDGLE PATVEGLVRR LNGRLPADVR VRRAVEAPAG FDARFGALWR RYAYRIADTP
AVVDPLTRSH VLAWPRALDL DAMNAASAFL VGRHDFASFC KQREGATTIR TLLELSWARD
PAGVLVGTVR ADAFCHSMVR SLVGCLIAVG EARKPVAWAE DILRAEARDP AVAVVHAHGL
TLEEVAYPAD DELAARAEQT RAKRVADE
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