Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3852 |
Symbol | |
ID | 4597987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4070751 |
End bp | 4071560 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639778458 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_925037 |
Protein GI | 119718072 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.223127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCACT CCTGGGACCC CGACCGTTAC CTCGCCTACG CCGACGAGCG CGGCCGCCCG TTCGTGGACC TGCTGGCCCG GGTGCGGGCC GAGGATCCTC GGACCGTGGT CGACCTCGGC TGCGGTCCGG GCAACCTGAC GAGGCTGCTC GCCGAGCGGT GGCCGGATGC GGCGGTCTCC GGCCTGGACT CCAGTCCGGA GATGATCCGG GCCGCGCGAG CCGCGGCGCC CGACCTGGCC TTCGAGGTCG CCGACCTGCG CGACTGGGCG CCGGCCGAGC CGGTCGACGT GCTCGTCGCG AACGCGGTGC TCCAGTGGGT GCCCGGCCAC CTCGAGCTGC TGCCCCGCCT GGTCGCGGGG CTCGCGCCCG GCGGCTGGCT CGCCTTCCAG GTGCCCGGCA ACTTCGAGGA GCCCAGCCAC ACGGTTCGCG ACCAGCTGGC CGCGGAGCCG CCGTACGCCG CCCACACCCG TGGTGTCGTC CTGCCGAGCA GCCACGACCC TCGTCGCTAC CTGGACGTCC TGGCCGGCCA CGGATGCACG GTGGATGCCT GGGAGACGAC GTACCTCCAC CTGCTCGCCG GCCCGGACCC GGTCTTCACC TGGGTGTCCG GCACCGGTGC GCGCCCGACG CTGCAAGCGC TCCCCGACGA CCTGCGGCCG GCGTTCGAGG CGGAGCTGCG GCGCCGGCTG GCCGAGGCCT ACCCGGTGCA CGAGTACGGC GTCGTGCTGC CGTTCCGCCG GGTGTTCGTC GTCGCGCGGG TGCCCGCGGC TCGCGGGTCG ACCCCCTCGC CGCGCGCGCC GCGCGCCTGA
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Protein sequence | MAHSWDPDRY LAYADERGRP FVDLLARVRA EDPRTVVDLG CGPGNLTRLL AERWPDAAVS GLDSSPEMIR AARAAAPDLA FEVADLRDWA PAEPVDVLVA NAVLQWVPGH LELLPRLVAG LAPGGWLAFQ VPGNFEEPSH TVRDQLAAEP PYAAHTRGVV LPSSHDPRRY LDVLAGHGCT VDAWETTYLH LLAGPDPVFT WVSGTGARPT LQALPDDLRP AFEAELRRRL AEAYPVHEYG VVLPFRRVFV VARVPAARGS TPSPRAPRA
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