Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3840 |
Symbol | |
ID | 4595905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4061142 |
End bp | 4061930 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639778446 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_925025 |
Protein GI | 119718060 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCGC GCATGGACAT CAACGGAGCC AGTGCCATCG TCACGGGTGG GGCGTCGGGC ATCGGCGCGG CCGCCGCTCG TCAGCTCGCC GAGAAGGGCG CGGTCGTCGT GGTCGCCGAC CTGCAGGCCG ACAAGGGCGA GGCGCTCGCC CAGGAGATCG GGGGCGTCTT CGCCCGGGTC GACGTCACCG ACACCGACCA GATCCGCGCG GCCGTCGAGG CCGCCGCCCA GATCGCCCCG CTGCGCGCGT GCGTCAACTC CGCCGGCATC GGCTGGGCGC AGCGCACCAT CGGCCGCGAC GGCGAGTTCG ACTCCGCGCA CGACCTGGAA GCCTTCCGCA AGGTGATCGC GATCAACCTG ATCGGCACCT TCGACATGGT CCGGCTCGCC GCGACCGCCA TGAGCCGCAA CGAGCCGGAC CAGGACGGCT GTCGCGGCGC GATCGTCAAC CTCGCCAGCG TGGCCGCCTT CGACGGCCAG ATCGGGCAGG CGTCGTACTC CGCCTCCAAG GGCGGGGTCG TCGGCATGAC CCTGCCCGTC GCCCGGGATC TCTCCGCCGC CGGCATCAGG CTCAACACGA TCGCTCCGGG CCTGATCGAC ACCCCGATCT ACGGCGAGGG CGAGGCCGCG GAGGCGTTCA AGGCCAAGCT CGGCGAGAGC GTGCTGTTCC CCAAGCGCCT CGGCGTGCCG GACGAGCTGG CCAGCATGGT CGTCGAGTGC ATCACCAACA GCTACCTGAA CGCCGAGGTG ATCCGCGTCG ACGGCGGCAT CCGGATGCCC CCCAAGTAG
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Protein sequence | MLARMDINGA SAIVTGGASG IGAAAARQLA EKGAVVVVAD LQADKGEALA QEIGGVFARV DVTDTDQIRA AVEAAAQIAP LRACVNSAGI GWAQRTIGRD GEFDSAHDLE AFRKVIAINL IGTFDMVRLA ATAMSRNEPD QDGCRGAIVN LASVAAFDGQ IGQASYSASK GGVVGMTLPV ARDLSAAGIR LNTIAPGLID TPIYGEGEAA EAFKAKLGES VLFPKRLGVP DELASMVVEC ITNSYLNAEV IRVDGGIRMP PK
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