Gene Noca_3793 details

Gene Information

• Locus tag: Noca_3793
• ID: 4597539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 4010724
• End bp: 4012670
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639778401
• Product: assimilatory nitrite reductase (ferredoxin) precursor
• Protein accession: YP_924980
• Protein GI: 119718015
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0155] Sulfite reductase, beta subunit (hemoprotein)

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0515701
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAGA CCCCGACGCG CACCCGACGC GCCCGAGCCG ACCGCCCGCC CCCCGACTGG 
GAGCAGGTCT ACCGACGCAA CTTCCTCGAA CGACTCAAGC GCGACCGGCC CCCGGTCGAC 
GTGCGCGCCG AGCTGCCCGA CCTGATCGCC CGCGGCTACG AGGCGGTCCC GGAGGAGGAC 
ATGGTCCGAC TGCACTGGTG GGGCATCGCC CACGACAAGC CGAAGGTGGG CACCTTCATG 
GTGCGGGTCA AGGTTCCCGG TGGCGTCCTC ACGGCGTCGC AGGTCCGCGG GCTGGGCCGG 
ATCGCGCGCG AACATGCCCG CGACGGGGTC GAGCTCACCA CCCGGCAGGG CGTCCAGCTT 
CACTGGGTCT CGATGGCGGA CCTACCCACC GTGGTCGCGG AGGTCGAGGC GATCGGCCTG 
AGCACCGCCG GCGCCGAGGG TGACACCGTC CGCAACGTCA CGGGCTGCCC GGTTGCGGGG 
TTGAGCGGCC ACGACGTCTT CGACGTGACC GATGTAGTTC GCGAGGTCGC GGCGTTCTTC 
GGGTCCCATC CCGACTACAA GAACCTGCCG CGCAAGCACA AGTACACGAT CTCCGCCTGC 
CCGGCCCAGT GCAACGCTCC GGAGATCTCC GACGTCGCGC TCGTGGCGGT GCTGCAGAAC 
GGTCGTCGCG GGTTCGCCCT CCGGGTCGGC GGCGGCATGG CGAACACCCC GCGCATCTCC 
CGGGACGTCG GCGTCTTCAT CCCCGTCGAG GACACCGTCG AGGTCCTCCG GGCGGTGACC 
GACGCCTGGC AGACCGACCT GCGCTACCGG ATGTCGCGGG CGCGGGCGCG GATCAAGTTC 
ATGATCGACG ACCTCGGCCC GGAGGCGTTC CGAGCCCGCG TCGAGCACCA GCTCGGGCAC 
GCACTCGGAG ACGGGGTGGC CCCGGACCCG GTCGGCGGGG CCGACCACCT GGGCGTGCAC 
CCACAGCGTG ATGGCGGTCG CGTCTACGTC GGGGTTCCGG TGCCCTCCGG ACGGCTGTCT 
GGAACGACCC TGACTCACCT GGCCGACCTG GTCGACGACA TCGGCGGCGA CCTGCGTCTC 
ACCCGGCAGC AGAACTTCGT GCTCGGTCAC GTGCCCGGAG CCCGCGTCGA GGAGGTCAGC 
GCCCGACTCG CCGAGCTGGG TGTCCCGGTC GACCGCAGCC GAGCCGTCGG ACGATCCGTC 
GCCTGCACGA GCAACCGGTT CTGCAACTAC TCCGTCGCCG AGACCAAGGA CAAGCTGGAC 
GGGATCCTCA CCCGGCTCGA AGCAACTCAC GGCGCGGAGC GCCTGTCCGA TCTGGCCATC 
CATCTCGACG GATGCCCCCA TGCCTGCGCG CAGCATTGGG TCGGAGAGAT CGGCCTGCAG 
GGCACCACGA CCCACGACCC CGACACCGGG GAACGGGTCG AGGCGTACGA CCTCAGCGTC 
GGTGGCGGCC TCGGCCGACG AACGGCGATC GGTCGACGGC TCGTCCGGCG TGTCCCCACG 
AAGGACGTCG AGGACGTGCT CGACCGGCTC GTCGGCGCCT GGCTGGCCGA ACAGGACCGG 
ACCGGCGGCC GACCGTCGTT CGGCGAGTTC TGCGACCTGC TGGAAGACGA CGAGCTCCTC 
GCCGTCTCCG TCGGCGCTCG CGGGTCCGTC GCCGGGCCCG GGGAGCGGGT GGACGCCGGG 
GTGCTGGTCC GGGTGCCCGG GCCGCTGCAG AGGTACGTCG ACGGCGCGGA CGAGCTGAGC 
GTCGACGGCC GGACCGTCGG CGGAGTGCTG GCCGAGGTGA CTCGCCGGCA TCCCCAGTTC 
GGCAGCACCG TCCTGCCCGA CGGCGAGGTG GCGGGCGCCT TCCTGGTCAC CGTCGGCGAC 
CAGGACATCC GTGGGCTGCA GGGGTTGTCC ACGGATGTCA CCCCGAACGA CACGATCACC 
ATCGTGATGG CGATGGCAGG GGGCTGA 

 

Protein sequence

MTETPTRTRR ARADRPPPDW EQVYRRNFLE RLKRDRPPVD VRAELPDLIA RGYEAVPEED 
MVRLHWWGIA HDKPKVGTFM VRVKVPGGVL TASQVRGLGR IAREHARDGV ELTTRQGVQL 
HWVSMADLPT VVAEVEAIGL STAGAEGDTV RNVTGCPVAG LSGHDVFDVT DVVREVAAFF 
GSHPDYKNLP RKHKYTISAC PAQCNAPEIS DVALVAVLQN GRRGFALRVG GGMANTPRIS 
RDVGVFIPVE DTVEVLRAVT DAWQTDLRYR MSRARARIKF MIDDLGPEAF RARVEHQLGH 
ALGDGVAPDP VGGADHLGVH PQRDGGRVYV GVPVPSGRLS GTTLTHLADL VDDIGGDLRL 
TRQQNFVLGH VPGARVEEVS ARLAELGVPV DRSRAVGRSV ACTSNRFCNY SVAETKDKLD 
GILTRLEATH GAERLSDLAI HLDGCPHACA QHWVGEIGLQ GTTTHDPDTG ERVEAYDLSV 
GGGLGRRTAI GRRLVRRVPT KDVEDVLDRL VGAWLAEQDR TGGRPSFGEF CDLLEDDELL 
AVSVGARGSV AGPGERVDAG VLVRVPGPLQ RYVDGADELS VDGRTVGGVL AEVTRRHPQF 
GSTVLPDGEV AGAFLVTVGD QDIRGLQGLS TDVTPNDTIT IVMAMAGG