Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3777 |
Symbol | |
ID | 4597523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3998015 |
End bp | 3999166 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639778385 |
Product | hypothetical protein |
Protein accession | YP_924964 |
Protein GI | 119717999 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTTCGC TTGGAGGGAC CGGCGGGGCG ACCACCGGTG GGTCGGCCTG GACCCCCGGG GTGGCCGCGC GGTTGCTGGC CGCGAGCAGA CGGCAGAGCG CCGCCGGTGC AGCGGGTATC GCCCTGGCCC TGATGCTGAT GCTCCTCCTC ACGGGGCTGT GGGCCGGGAT CCAGGAACGG GTCACGACGT ACGACGACCA CACCCGCGCC GACCTGGTCG TCGTCCCTCC CGACACGCAC ACGCTGTTCG CCGACCCAGG GGTGCTCCCC GCCGGGACGA CCGCAGCCGT GGGTCAGGTC GACGGCGTCA CCGCGACTGC GAGTGTGCGC ACCATGTACC AGATCCTGGA GCTGGCGCAT GGGAAGGCTG CGACCGCGAC GGTGGCGTTC GACCCAGCCA GCGGGATGGG CGGGCCCTGG GACATCGAGG ACGGGCGGGC GCCGGTCGCG ATCGACGAGG TGGCCGTCGA TGCGGTCTTC GCCGACCAGC ACGGGCTGGC GCTCGGTGAT CGGCTCCCGA TCCTCGGCCA CCAGATGCGG ATCGTGGGCC GGACCGGTGG CACCGCCCTG TTCATGACCC CGCTGCTGTT CCTCACCACG GACGCGGTCA ACGACATGCT GGACTCGCCC GGCGCGGCCG GTGCCGTGCT GATCAGCGCC GACGATCCCA CCGCCGTGCG GCGGCAGCTC ACAGCGGCCG GGTACGCCGT CCGGACGCCG CGCGAGCTCC ACCAGGAGTC CCTGAGCCTG GCCACCTCGA TCTACGGCAC GCCGGTCCGG CTCATGGTCG GAGTCGCGTT CGCGGCCGGG ACCTTGATCG TCGCGCTCGT CGCCTACACG CGCATCTGCG AGCAACAGCG CGACCTGGGC ATCCTGAAGG CGCTGGGGGC GACCCCGCGA GACCTCCGAC GGATCACCCT GGCCGAGACG GCGGTGCTCG CTGCGACCGG CGCGGTCGGC TCGGTCGTGC TGCTCCTGCT CGCGCGAGAG CTGCTGGCGT GGTGGCGCCC CGCCTTCCCG GTCGTGATCA CCCGGACGAC CCTCGTGCAG ACGACGACCG CGGCAGTGGC GATGACGCTG CTGGCCGCCT GGCTGCCGGT CCGCCGGATC GGCCGGCTCG ACGCCGCCTC GGCCTTCAGG ACCGGACGAT GA
|
Protein sequence | MSSLGGTGGA TTGGSAWTPG VAARLLAASR RQSAAGAAGI ALALMLMLLL TGLWAGIQER VTTYDDHTRA DLVVVPPDTH TLFADPGVLP AGTTAAVGQV DGVTATASVR TMYQILELAH GKAATATVAF DPASGMGGPW DIEDGRAPVA IDEVAVDAVF ADQHGLALGD RLPILGHQMR IVGRTGGTAL FMTPLLFLTT DAVNDMLDSP GAAGAVLISA DDPTAVRRQL TAAGYAVRTP RELHQESLSL ATSIYGTPVR LMVGVAFAAG TLIVALVAYT RICEQQRDLG ILKALGATPR DLRRITLAET AVLAATGAVG SVVLLLLARE LLAWWRPAFP VVITRTTLVQ TTTAAVAMTL LAAWLPVRRI GRLDAASAFR TGR
|
| |