Gene Noca_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3777 
Symbol 
ID4597523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3998015 
End bp3999166 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content73% 
IMG OID639778385 
Producthypothetical protein 
Protein accessionYP_924964 
Protein GI119717999 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTCGC TTGGAGGGAC CGGCGGGGCG ACCACCGGTG GGTCGGCCTG GACCCCCGGG 
GTGGCCGCGC GGTTGCTGGC CGCGAGCAGA CGGCAGAGCG CCGCCGGTGC AGCGGGTATC
GCCCTGGCCC TGATGCTGAT GCTCCTCCTC ACGGGGCTGT GGGCCGGGAT CCAGGAACGG
GTCACGACGT ACGACGACCA CACCCGCGCC GACCTGGTCG TCGTCCCTCC CGACACGCAC
ACGCTGTTCG CCGACCCAGG GGTGCTCCCC GCCGGGACGA CCGCAGCCGT GGGTCAGGTC
GACGGCGTCA CCGCGACTGC GAGTGTGCGC ACCATGTACC AGATCCTGGA GCTGGCGCAT
GGGAAGGCTG CGACCGCGAC GGTGGCGTTC GACCCAGCCA GCGGGATGGG CGGGCCCTGG
GACATCGAGG ACGGGCGGGC GCCGGTCGCG ATCGACGAGG TGGCCGTCGA TGCGGTCTTC
GCCGACCAGC ACGGGCTGGC GCTCGGTGAT CGGCTCCCGA TCCTCGGCCA CCAGATGCGG
ATCGTGGGCC GGACCGGTGG CACCGCCCTG TTCATGACCC CGCTGCTGTT CCTCACCACG
GACGCGGTCA ACGACATGCT GGACTCGCCC GGCGCGGCCG GTGCCGTGCT GATCAGCGCC
GACGATCCCA CCGCCGTGCG GCGGCAGCTC ACAGCGGCCG GGTACGCCGT CCGGACGCCG
CGCGAGCTCC ACCAGGAGTC CCTGAGCCTG GCCACCTCGA TCTACGGCAC GCCGGTCCGG
CTCATGGTCG GAGTCGCGTT CGCGGCCGGG ACCTTGATCG TCGCGCTCGT CGCCTACACG
CGCATCTGCG AGCAACAGCG CGACCTGGGC ATCCTGAAGG CGCTGGGGGC GACCCCGCGA
GACCTCCGAC GGATCACCCT GGCCGAGACG GCGGTGCTCG CTGCGACCGG CGCGGTCGGC
TCGGTCGTGC TGCTCCTGCT CGCGCGAGAG CTGCTGGCGT GGTGGCGCCC CGCCTTCCCG
GTCGTGATCA CCCGGACGAC CCTCGTGCAG ACGACGACCG CGGCAGTGGC GATGACGCTG
CTGGCCGCCT GGCTGCCGGT CCGCCGGATC GGCCGGCTCG ACGCCGCCTC GGCCTTCAGG
ACCGGACGAT GA
 
Protein sequence
MSSLGGTGGA TTGGSAWTPG VAARLLAASR RQSAAGAAGI ALALMLMLLL TGLWAGIQER 
VTTYDDHTRA DLVVVPPDTH TLFADPGVLP AGTTAAVGQV DGVTATASVR TMYQILELAH
GKAATATVAF DPASGMGGPW DIEDGRAPVA IDEVAVDAVF ADQHGLALGD RLPILGHQMR
IVGRTGGTAL FMTPLLFLTT DAVNDMLDSP GAAGAVLISA DDPTAVRRQL TAAGYAVRTP
RELHQESLSL ATSIYGTPVR LMVGVAFAAG TLIVALVAYT RICEQQRDLG ILKALGATPR
DLRRITLAET AVLAATGAVG SVVLLLLARE LLAWWRPAFP VVITRTTLVQ TTTAAVAMTL
LAAWLPVRRI GRLDAASAFR TGR