| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3769 |
|---|
| Symbol | |
|---|
| ID | 4597515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3990516 |
|---|
| End bp | 3991550 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639778377 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) |
|---|
| Protein accession | YP_924956 |
|---|
| Protein GI | 119717991 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0012564 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC AGGCAGCGGC ACAGCCCGCG ACTCCCCAGC AGGCCGGCGG CGGGACGGGC
CTCGACCCCG CCGTGCGGCT CGACCTCTAC GAGACGATGG TGCTCTCGCG CACCTACGAG
GAGGCGATCC TGCGCGAGTA CCACGCGGAC AAGGGCCCGG GCTTCGACAT CGGCAAGGGC
CTGATCCCGG GCGAGATGCA CCTGTCCGCG GGTCAGGAGC CCGTCGCCGC CGGGGTCTGC
GCGCACCTCA CCACCGACGA TGCCGTCACC GCCACCCACC GGCCGCACCA CTTCGCGGTC
GCGCACGGCG TGGACCTGCG GCGGATGACC GCCGAGATCT TCGGCCGCGA GGACGGGCTG
GGCCGAGGGC GGGGCGGCCA CATGCACCTG TTCGACCCGG ACACGCACTT CTCCTGCTCC
GGCATCATCG CCGAGGGCTA TCCGCCCGCT CTCGGCCAGG CCTTCGCGTT CCACCGCCAG
GGCACCGACC GGATCGCCGT GGCCGTCACC GGCGAGGGCG CGGCCAACCA GGGCGCGTTC
CACGAGTCGT TGAACCTCGC CGCCCGCTGG TCGTTGCCGG TCGTCTTCGT CGTGGAGGAC
AACGACTGGG GGATCTCGGT GCCGCGGACC GCGTCGACCT CCGTGGCCTC GAACGCCGAT
CGGGCCGCGG CGTACGGCAT CCCCGGCGAG CGGATCGAGG GCAACGACGT CGAAGGGGTG
TACGACGCCG CGAGGCGTGC GGTCGCCCGC GCCCGTGCCG GGGAGGGCCC CTCGCTCATC
GAGGTGCACA CGCTGCGGTT GTGGGGCCAC TTCGAGGGCG ACGCCCAGGG CTATCGGCTC
GACCTGGAGG ACGCGCCGAG CCACGACCCG ATCCCCCGCT ACGAGACCCG GCTCCGCGAG
GCCGGCGTAC TCGACGACGA AACGGTCACG CGGATCAGGA GCGCCGCCAG CGAGCGCACC
GAGGACGCGA TCGCGTTCGC GAAGAACAGC CCCGTGCCGG ACCCTGCGTC GGCCACGTCC
TACGTGTTCG CCTGA
|
|---|
| Protein sequence | MTTQAAAQPA TPQQAGGGTG LDPAVRLDLY ETMVLSRTYE EAILREYHAD KGPGFDIGKG
LIPGEMHLSA GQEPVAAGVC AHLTTDDAVT ATHRPHHFAV AHGVDLRRMT AEIFGREDGL
GRGRGGHMHL FDPDTHFSCS GIIAEGYPPA LGQAFAFHRQ GTDRIAVAVT GEGAANQGAF
HESLNLAARW SLPVVFVVED NDWGISVPRT ASTSVASNAD RAAAYGIPGE RIEGNDVEGV
YDAARRAVAR ARAGEGPSLI EVHTLRLWGH FEGDAQGYRL DLEDAPSHDP IPRYETRLRE
AGVLDDETVT RIRSAASERT EDAIAFAKNS PVPDPASATS YVFA
|
|---|
| |