| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3674 |
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| Symbol | |
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| ID | 4595786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3896816 |
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| End bp | 3897853 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639778282 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_924861 |
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| Protein GI | 119717896 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.174812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCCCG ATCCGCGACT CGCCGACAGC GCCTTCCTGA AGGCGGCCCG CGGCGAGCCG
GTGCCGCACA CGCCGGTGTG GTACATGCGC CAGGCGGGCC GCTCGCTGCC GGAGTACCTC
GCCGTCCGCG AGGGCATCGG CATGCTGGAG TCCTGCATGG ACCCGGACCT GGTGGTGGAG
ATCACGCTCC AGCCGGTGCG GCGGTACGGC GTGGACGCGG CGATCTTCTT CTCCGACATC
GTGCTGCCGC TCAAGGCGGT CGGCGTCGAC CTGGACATCA AGCCGGGTGT CGGGCCGGTC
GTCGCCCACC CGGTGCGCAC GCTGGCCGAC GTCGAGGCGA TCCCGGACCT GACCCCCGAG
CACGTCCCGT TCATCACCGA GGCGGTCCGC GGGCTGGTCG GCGAGCTGGG CGGCACCCCG
CTCATCGGGT TCGCGGGTGC TCCGTTCACG GTCGCGTCGT ACCTCGTCGA GGGCGGGCCC
TCCAAGGAGC ACGCGCGGAC CAAGGCGATG ATGTTCGGCG CCCCCGACGT GTGGGACGCG
CTGCTGCGCA AGATCGCCGG CATCTCCGCC TCCTACCTCG AGGTCCAGGT CGCCGCCGGC
GCCTCCGCCG TCCAGCTCTT CGACTCCTGG GCCGGCGCGC TGACCCCGGC CGACTACCGG
GCGTTCGTGA TGCCGCACTC CGCGCGCGTG CTCGAGCGCG CCGGCGCGCT CGGGGTGCCG
CGTATCCACT TCGGCGTCGG TACGGCGAAC CTGCTCGGCC TGATGGGCGA GGCGGGTGCC
GACGTGGTCG GCGTCGACTG GCGCACCCCG CTCGCGCACG CGATCGCGCT GGTCGGCGAC
CGTGGGGTGC AGGGCAACCT CGACCCCACG CTGGTCTTCG CCCCGACCGA GGTGATGACC
GCCCGCGCCG CCGAGATCGT CGAGGCCGGC CGGGCCGCGC GCGGTCACAT CTTCAACCTC
GGCCACGGCG TCATCCCCTC CACCGACCCC GACCAGCTCA AGCGGCTCAC CGAGTTCGTC
CAGACCTACC CCCGCTGA
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| Protein sequence | MTPDPRLADS AFLKAARGEP VPHTPVWYMR QAGRSLPEYL AVREGIGMLE SCMDPDLVVE
ITLQPVRRYG VDAAIFFSDI VLPLKAVGVD LDIKPGVGPV VAHPVRTLAD VEAIPDLTPE
HVPFITEAVR GLVGELGGTP LIGFAGAPFT VASYLVEGGP SKEHARTKAM MFGAPDVWDA
LLRKIAGISA SYLEVQVAAG ASAVQLFDSW AGALTPADYR AFVMPHSARV LERAGALGVP
RIHFGVGTAN LLGLMGEAGA DVVGVDWRTP LAHAIALVGD RGVQGNLDPT LVFAPTEVMT
ARAAEIVEAG RAARGHIFNL GHGVIPSTDP DQLKRLTEFV QTYPR
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