Gene Noca_3659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3659 
Symbol 
ID4595771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3884595 
End bp3885296 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID639778267 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_924846 
Protein GI119717881 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGCAA TCGGTCGTCA CGGCTTTCGC CCTAGCGTTG CTGCTGCACC ACCCGGAACG 
ATGGAGAGAT CCGTGGAAGT GTCAGCGCTA GCGGCGTTCA TCGGCGTCGC GACGACCCTC
GTCATCGTGC CCGGTCCGGA CTGGGCCGTC GTCCTCGGCG CCGGACCGCG TCGGTCACTC
GTGTTACCCA CCGTCAGCGG GCTGGCGATC GGGTACATCG TCATCACTGC AGTCGTGGTC
GCCGGCATGG CACCCCTAGT CGCAGCCGAG CCCGCAGCCC TCACCGCCCT GTCTGTTGTC
GGTGGCGTCT ACCTGCTCTA CGTCGGCGTC GGCATCGTGC GGTCGCCGAA CCGGGGTGTC
GTACCAACAG CCACGTCATC GAGCCGTGAC GCGGTACATG CCCTGGGTCG TGGCGTCGGA
GTCAGCGCCC TGAACCCCAA GTCCCTCCTG TTCTTCCTGG CGTTCCTGCC CCAGTTCGCG
CGCACCAGCG CTCCATGGCC CTTCGCGGTC CAACTCGCAG TCCTCGGCCT CACCTGGGTC
GCCATCGCCG CAACCTTCTA CTTCGCCCTC GGATTCGCCG TCCAGACCGC CCTGACACGA
AGACCACGCG TGACCTCCAG ACTCGCCTGG ATCTCAGGGG CAGCCATGCT TCTCGCCGGC
TCCGCACTCC TCGCCGAACA GGTCATCCGC GCCGTGCACT GA
 
Protein sequence
MFAIGRHGFR PSVAAAPPGT MERSVEVSAL AAFIGVATTL VIVPGPDWAV VLGAGPRRSL 
VLPTVSGLAI GYIVITAVVV AGMAPLVAAE PAALTALSVV GGVYLLYVGV GIVRSPNRGV
VPTATSSSRD AVHALGRGVG VSALNPKSLL FFLAFLPQFA RTSAPWPFAV QLAVLGLTWV
AIAATFYFAL GFAVQTALTR RPRVTSRLAW ISGAAMLLAG SALLAEQVIR AVH