| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3633 |
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| Symbol | gabD2 |
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| ID | 4597456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3852802 |
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| End bp | 3854424 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639778241 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_924820 |
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| Protein GI | 119717855 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCC AGAGCCCGAC TCCCGCCGGC GGCCCGGTCG TCGAAGGCCC GTTCGACCCC
GAGCACGACC CGACGGCGGC CTACGCCCTC GAGCCGGAGT ACGCCGACGC GCTCACCCGG
CGCCTGGTCG CCACCGCCGG CCGCTCGGTC CAGGTCCGGT CCCCGCTCAA CGACGCCCCG
CTCGGGCACG TCCCGCAGTC CACCGTCGAG GACGTCGCGA CGGCATTCGA GCGGGCCCGA
AGGGCGCAGG TCGCCTGGGC CCGCACCCCG CTCGCGGAGC GCTCGGCGAT CCTGCTGCGG
CTGCACGACC TGGTGCTCGA CCACCAGGAC GAGATCATCG ACCTGATCGT CTGGGAGAGC
GGCAAGGCCC GCAAGCACGC CTTCGACGAG CCGCTGCACG TCGCGCTGAC CGCCCGCTAC
TACGCGCGCA CCGCCAAGCG GCACCTCGGC ACCGAGCGCA AGATCGGGGT CGTGCCCGGC
CTGACCCGGG TCGAGGTCAA CCACAACCCG GTCGGCGTCG TCGGGATCAT CTCGCCCTGG
AACTACCCCT TCAACCTGGC GCTGATCGAC GGCATCGCCG CGCTGATGGC CGGCAACGCG
GTCGTCGCCA AGCCGGACTC GCAGACGATG CTCTCCGCGC TGCTCGGTGC CCGGCTGCTC
GATCAGGCCG GCCTGCCGCG CGACCTGTGG CAGGTCGTCG CCGGCCCGGG CGCGGAGATC
GGCGGCGCGA TCGTCGAGCG GGCCGACTAC GTCTGCTTCA CCGGCTCGAC CGCCACCGGC
CGGTCGATCG CGAAGGGCTG CGCGGACCGG CTGATCGGCT GCTCGCTCGA GCTCGGCGGC
AAGAACCCGC TCCTCGTGCT CCGCGACGCC GACCTCGAGA AGGCCGCGGA GGGCGCCGTA
CGCGCCTCGT TCTCCAACGC CGGCCAGTTG TGCGTCTCGA TGGAGCGGAT CTTCGTCGCC
GACCAGCTCT ACGACCGGTT CGTGGACCGG TTCGTGGCCC GCACCGAGGC GCTGACCCTC
GGCGCGACCC TGGACTGGGG CAACGACATG GGCCCGCTGA TCTCCCAGGC CCAGCTCGAC
ACGGTCACCG CCCACGTCGA CGACGCGGTC GCCAAGGGCG CCCGGGTGCT CGCCGGCGGC
AAGGCCCGCC CCGACCTCGG CCCGTACTTC TTCGAGCCGA CCATCCTCGA GGGGGTCAGC
CCCGACATGA CCTGCTTCGG CAAGGAGACC TTCGGGCCGG TCGTGTCGCT CTACCGGTTC
CACGACGAGG TCGACGCCGT CGCCCGGGCC AACGACGGCG AGTACGGCCT GAACGCCTCG
GTCTACAGCC GCGACGGCGC CCGGGCGCGG CTGATCGCCC GGCACCTGCG CTGCGGGACC
GTCAACGTCA ACGAGGCCTT CGCCGCGACC TTCGCGAGCA TCGACGCCCC GATGGGCGGC
ATGCGCGAGT CCGGCGCCGG CCGCCGCCAG GGCGCGATGG GCGTCCGGCG GTTCACCGAG
ACCCAGGCCG TCGCGACCCA GCGGCTGATC CGGTTCGCCC CGCAGTACGG CATGTCCGAC
CAGATGTACG CCAAGGTCAT GAACGCCAAC CTGCGCCTGA TGAAGAAGGT GGGACGCGCA
TGA
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| Protein sequence | MSAQSPTPAG GPVVEGPFDP EHDPTAAYAL EPEYADALTR RLVATAGRSV QVRSPLNDAP
LGHVPQSTVE DVATAFERAR RAQVAWARTP LAERSAILLR LHDLVLDHQD EIIDLIVWES
GKARKHAFDE PLHVALTARY YARTAKRHLG TERKIGVVPG LTRVEVNHNP VGVVGIISPW
NYPFNLALID GIAALMAGNA VVAKPDSQTM LSALLGARLL DQAGLPRDLW QVVAGPGAEI
GGAIVERADY VCFTGSTATG RSIAKGCADR LIGCSLELGG KNPLLVLRDA DLEKAAEGAV
RASFSNAGQL CVSMERIFVA DQLYDRFVDR FVARTEALTL GATLDWGNDM GPLISQAQLD
TVTAHVDDAV AKGARVLAGG KARPDLGPYF FEPTILEGVS PDMTCFGKET FGPVVSLYRF
HDEVDAVARA NDGEYGLNAS VYSRDGARAR LIARHLRCGT VNVNEAFAAT FASIDAPMGG
MRESGAGRRQ GAMGVRRFTE TQAVATQRLI RFAPQYGMSD QMYAKVMNAN LRLMKKVGRA
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