Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3570 |
Symbol | |
ID | 4599449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3787513 |
End bp | 3788631 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639778178 |
Product | hypothetical protein |
Protein accession | YP_924757 |
Protein GI | 119717792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.854766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGGGC CGGTGCGAGA GCCGGCTGCT GGTACCGACT TCGACGGGAC ACGCCTTACC GTCGCGCGTC GGCTGCGCCG CAAGACGAAA GCACAACTCG CACGCGAACT CGGCATCAGC GCGACCGCGA TAGCGCAGTA TGAGAAGGGC CAGGCGCGCC CGTCCTCGGG CGTCCTCAAC CAAATCTGCC TAAGCCTCGG CCTTCCGCGC GAGTTCTTCG GAGTCTCGAG GCCCCTGACG CTCCTCCCCG CATCCGGGGC CCACTTCCGC TCCCTGCGCG CCACTCCAGC CACGTCCCGC GAGCAAGCAC TCGCATACGG CGAACTGAGC CTGGAGCTCA TCGACCTCAT CAGCCAGTAC GTGCACCTGC CACCCGTGCG TCTCCCAGAA GTCGACATCC CAGACGAACT CACCGACGAC GACATCATCA GCGCCGCCAA CGGCACACGC GCAGCATGGA ACATCGCCCC CGGGCCCGTG CCATCACTCG TCCAGACGAT GGAGGCACAC GGCATCGTCG TGCTGCGCCT ACCCGGCGAC ACCCCTCACG CAGTCGACGC ATTCTCGACC TTCACTGCAC GTCGACCCCT GGTGTTCCTG TCCCCAGCGA AGAACGACAA GGGGCGCAGT CGCTTTGACG CCGCACACGA ACTAGGCCAC CTCGTCCTTC ACCCAGATAC CGAGCCCGGT TCGAAGCTCG TCGAACAACA GGCGCACAGG TTCGCGAGCG AGTTCCTGAT GCCGCGCGAC CAAATCATCT CCGACCTACC CCGCCGCATC GACTGGCCAA AGTTCCACGA ACTCAAGCGG CACTGGGGCG TCAGCCTGAG GGCACTCGTA TATCGCGCCC ATGCCCTGGG CCGACTTTCA GAAGCGTCCT ACCGACGTGC GAACCAGCAG CTCTCCCAGT GGGGACTTCC CGAGCCGGGC GAACTGGGCC CCGCCGAAAC GCCGACCCTT CTAGGTCTGG TGCAGACGAC CATGCGCGAC AGCGGGCTCG ATCTTCACGA CATCCTTGCC TCTAGTCGCA TCGCACCCGC ACTTGCAGAA GAGATCGTGC GCGCCGGGTC GGACAACCGG CCCACCCTCG CCGTCGCGCC CTCCGACGCA TGGAACTAG
|
Protein sequence | MTGPVREPAA GTDFDGTRLT VARRLRRKTK AQLARELGIS ATAIAQYEKG QARPSSGVLN QICLSLGLPR EFFGVSRPLT LLPASGAHFR SLRATPATSR EQALAYGELS LELIDLISQY VHLPPVRLPE VDIPDELTDD DIISAANGTR AAWNIAPGPV PSLVQTMEAH GIVVLRLPGD TPHAVDAFST FTARRPLVFL SPAKNDKGRS RFDAAHELGH LVLHPDTEPG SKLVEQQAHR FASEFLMPRD QIISDLPRRI DWPKFHELKR HWGVSLRALV YRAHALGRLS EASYRRANQQ LSQWGLPEPG ELGPAETPTL LGLVQTTMRD SGLDLHDILA SSRIAPALAE EIVRAGSDNR PTLAVAPSDA WN
|
| |